Andreas Tille pushed to branch master at Debian Blends Team / med
Commits: ed2b5628 by Andreas Tille at 2019-02-04T15:05:59Z Drop additional information from packages that are available now - - - - - 1 changed file: - tasks/bio Changes: ===================================== tasks/bio ===================================== @@ -1912,37 +1912,8 @@ Pkg-Description: processes, clusters and annotates EST data Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html Recommends: lamarc -Homepage: http://evolution.genetics.washington.edu/lamarc/index.html -Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/ -Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html. - In 1/2018 upstream has apparently updated their tarball to help the - redistribution of their software. Someone please go for it. Recommends: lucy -Homepage: http://lucy.sourceforge.net/ -License: GPL -Responsible: BioLinux - Dan Swan <[email protected]> -Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/ -Pkg-Description: DNA sequence quality and vector trimming tool - Lucy is a utility that prepares raw DNA sequence fragments for - sequence assembly, possibly using the TIGR Assembler. The cleanup - process includes quality assessment, confidence reassurance, vector - trimming and vector removal. The primary advantage of Lucy over other - similar utilities is that it is a fully integrated, stand alone - program. - . - Lucy was designed and written at The Institute for Genomic Research - (TIGR, now the J. Craig Venter Institute), and it has been used here - for several years to clean sequence data from automated DNA - sequencers prior to sequence assembly and other downstream uses. The - quality trimming portion of lucy makes use of phred quality scores, - such as those produced by many automated sequencers based on the - Sanger sequencing method. As such, lucy’s quality trimming may not - be appropriate for sequence data produced by some of the new - “next-generation” sequencers. - . - See also the SourceForge page at http://lucy.sourceforge.net/. -Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html Recommends: maxd Homepage: http://www.bioinf.man.ac.uk/microarray/maxd/ View it on GitLab: https://salsa.debian.org/blends-team/med/commit/ed2b5628045bf385fdf5bcd93508929650a98696 -- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/ed2b5628045bf385fdf5bcd93508929650a98696 You're receiving this email because of your account on salsa.debian.org.
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