Andreas Tille pushed to branch master at Debian Blends Team / med
Commits: d3d242a1 by Andreas Tille at 2020-03-24T09:41:09+01:00 Create some sections by using simple comments, add fastqc - - - - - 1 changed file: - tasks/covid-19 Changes: ===================================== tasks/covid-19 ===================================== @@ -5,6 +5,8 @@ Description: This task exists only for tagging COVID-19 relevant cases COVID-19 Biohackathon (April 5-11, 2020) This task was created only for the purpose to list relevant packages. +# <bio> + Recommends: cwltool, snakemake Recommends: augur, auspice @@ -13,9 +15,7 @@ Recommends: chime Recommends: chip-seq -Recommends: streamlit -Remark: Needs help from Debian Science team - This is a machine learning framework which is required by chime. +Recommends: fastqc Recommends: nextstrain-ncov Remark: needs auspice @@ -29,15 +29,7 @@ Remark: Non-distributable due to locfit dependency Recommends: r-cran-spp -# https://opensourceventilator.ie/ -# -> https://gitlab.com/open-source-ventilator/OpenLung - -# https://www.mikrocontroller.net/topic/491565 -# -> https://github.com/jcl5m1/ventilator - -# https://sormasorg.helmholtz-hzi.de/Open_source.html -# -> https://github.com/hzi-braunschweig/SORMAS-Project - +# </bio> # <imaging> @@ -67,3 +59,24 @@ Suggests: orthanc-webviewer, orthanc-dicomweb, orthanc-imagej, orthanc-postgresq Recommends: orthanc-wsi # </imaging> + +# <tools> + +# https://opensourceventilator.ie/ +# -> https://gitlab.com/open-source-ventilator/OpenLung + +# https://www.mikrocontroller.net/topic/491565 +# -> https://github.com/jcl5m1/ventilator + +# https://sormasorg.helmholtz-hzi.de/Open_source.html +# -> https://github.com/hzi-braunschweig/SORMAS-Project + +# </tools> + +# <preconditions> + +Recommends: streamlit +Remark: Needs help from Debian Science team + This is a machine learning framework which is required by chime. + +# </preconditions> View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/d3d242a1039c71360036c15c9a1de5011ac24fe1 -- View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/d3d242a1039c71360036c15c9a1de5011ac24fe1 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ Blends-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/blends-commit
