Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
3affc14e by Andreas Tille at 2020-05-18T22:12:33+02:00
Update status oc COVID-19 packages
- - - - -
1 changed file:
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,14 +1,14 @@
-Last-Update: Fri, 15 May 2020 22:24:02 +0200
+Last-Update: Mon, 18 May 2020 22:10:21 +0200
package | architectures | section |
releases | conda | bio.tools
-----------------------------+---------------------+----------+---------------------------------------------+--------------------------+--------------
abacas | all | main |
buster,bullseye,sid | |
- allelecount | | | new
| |
+ allelecount | amd64,arm64,ppc64el | main | sid
| cancerit-allelecount |
bcftools | amd64,arm64,ppc64el | main |
buster,bullseye,sid | bcftools |
bcftools
bedtools | amd64,arm64,ppc64el | main |
buster,bullseye,sid | biotools |
bedtools
bio-guppy | | |
| |
bowtie2 | amd64,arm64,ppc64el | main |
buster,bullseye,sid | bowtie2 | bowtie2
- busco | | | new
| |
+ busco | all | main | sid
| |
bustools | amd64,arm64,ppc64el | main | bullseye,sid
| bustools | BUStools
bwa | amd64,arm64,ppc64el | main |
buster,bullseye,sid | bwa | BWA
cat | | |
| |
@@ -19,7 +19,7 @@ Last-Update: Fri, 15 May 2020 22:24:02 +0200
drop-seq-tools | | |
| |
fastp | amd64,arm64,ppc64el | main |
buster,bullseye,sid | fastp |
fastqc | all | main |
buster,bullseye,sid | fastqc | FastQC
- filtlong | | | new
| |
+ filtlong | amd64,arm64,ppc64el | main | bullseye,sid
| |
freebayes | amd64,arm64,ppc64el | main |
buster,bullseye,sid | freebayes |
freebayes
gatk | | |
https://salsa.debian.org/med-team/gatk | |
graphmap2 | | |
https://salsa.debian.org/med-team/graphmap2 | |
@@ -40,7 +40,7 @@ Last-Update: Fri, 15 May 2020 22:24:02 +0200
ncbi-blast+ | amd64,arm64,ppc64el | main |
buster,bullseye,sid | blast | blast
nextflow | | |
https://salsa.debian.org/med-team/nextflow | |
nf-core | | |
| |
- parallel-fastq-dump | | | new
| |
+ parallel-fastq-dump | all | main | sid
| |
picard-tools | amd64 | main |
buster,bullseye,sid | picard |
Picard_tools
porechop | amd64,arm64,ppc64el | main |
buster,bullseye,sid | |
presto | | |
| |
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/3affc14e21c4aa3a3469756746d572727b732d14
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/3affc14e21c4aa3a3469756746d572727b732d14
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