Author: tille Date: Thu Jul 29 14:15:56 2010 New Revision: 2293 URL: http://svn.debian.org/viewsvn/blends?rev=2293&view=rev
Log: Removed extra information of now official packages Modified: projects/med/trunk/debian-med/tasks/bio projects/med/trunk/debian-med/tasks/bio-dev Modified: projects/med/trunk/debian-med/tasks/bio URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2293&view=diff&r1=2293&r2=2292&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio ============================================================================== --- projects/med/trunk/debian-med/tasks/bio (original) +++ projects/med/trunk/debian-med/tasks/bio Thu Jul 29 14:15:56 2010 @@ -344,6 +344,10 @@ Depends: picard-tools +Depends: acedb-other-dotter, acedb-other-belvu, acedb-other + +Depends: python-cogent + Depends: r-other-genabel Homepage: http://mga.bionet.nsc.ru/nlru/GenABEL/ Responsible: Steffen Moeller <[email protected]> @@ -628,10 +632,11 @@ Depends: jmol Homepage: http://jmol.sourceforge.net/ -Responsible: Vincent Fourmond <[email protected]> +Responsible: Michael Banck <[email protected]> +X-Old-Responsible: Vincent Fourmond <[email protected]> License: LGPL WNPP: 512930 -Vcs-Svn: svn://svn.debian.org/svn/pkg-escience/jmol/trunk/debian/ +Vcs-Svn: svn://svn.debian.org/svn/debichem/unstable/jmol/ Pkg-Description: viewer for chemical structures in 3D Jmol is a Java molecular viewer for three-dimensional chemical structures. Features include reading a variety of file types and output from quantum @@ -1856,33 +1861,6 @@ http://www.sanger.ac.uk/Software/ACT/Examples/ Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html -Depends: acedb-other-dotter, acedb-other-belvu - -Depends: acedb-other -Homepage: http://www.acedb.org/ -License: GPL / LGPL -Language: C, C++ -WNPP: 542068 -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/acedb/trunk/?rev=0&sc=0 -Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/acedb/trunk/ -Responsible: Steffen Moeller <[email protected]> -Pkg-Description: tools designed to manipulate genomic data - AceDB is a genome database system developed since 1989 primarily by - Jean Thierry-Mieg (CNRS, Montpellier) and Richard Durbin (Sanger - Institute). It provides a custom database kernel, with a non-standard - data model designed specifically for handling scientific data - flexibly, and a graphical user interface with many specific displays - and tools for genomic data. AceDB is used both for managing data - within genome projects, and for making genomic data available to the - wider scientific community. - . - AceDB was originally developed for the C.elegans genome project , - from which its name was derived (A C. elegans DataBase). However, the - tools in it have been generalized to be much more flexible and the - same software is now used for many different genomic databases from - bacteria to fungi to plants to man. It is also increasingly used for - databases with non-biological content. - Comment: If you stumble upon alfresco at http://www.sanger.ac.uk/Software/Alfresco/ - it seems outdated and tarball vanished from the downlowad page. So this is not for us even @@ -3259,23 +3237,6 @@ Published-Year: 2010 Published-DOI: 10.1093/bioinformatics/btp636 -Depends: python-cogent -WNPP: 587161 -Homepage: http://pycogent.sourceforge.net/ -License: GPL -Language: Python -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/python-cogent/trunk/?rev=0&sc=0 -Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/python-cogent/trunk/ -Responsible: Steffen Moeller <[email protected]> -Pkg-Description: framework for genomic biology - PyCogent is a software library for genomic biology. It is a fully - integrated and thoroughly tested framework for: controlling third-party - applications; devising workflows; querying databases; conducting novel - probabilistic analyses of biological sequence evolution; and generating - publication quality graphics. It is distinguished by many unique built-in - capabilities (such as true codon alignment) and the frequent addition - of entirely new methods for the analysis of genomic data. - Depends: denoiser WNPP: 587274 Homepage: http://www.microbio.me/denoiser/ Modified: projects/med/trunk/debian-med/tasks/bio-dev URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio-dev?rev=2293&view=diff&r1=2293&r2=2292&p1=projects/med/trunk/debian-med/tasks/bio-dev&p2=projects/med/trunk/debian-med/tasks/bio-dev ============================================================================== --- projects/med/trunk/debian-med/tasks/bio-dev (original) +++ projects/med/trunk/debian-med/tasks/bio-dev Thu Jul 29 14:15:56 2010 @@ -76,6 +76,8 @@ Depends: libbio-mage-utils-perl +Depends: libace-perl + Depends: bioconductor Homepage: http://www.bioconductor.org/ Responsible: Debian CRAN/BioConductor/Omegahat packaging team <[email protected]> _______________________________________________ Blends-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/blends-commit
