On Sun, Jul 11, 2021 at 7:29 PM Peter Murray-Rust <pm...@cam.ac.uk> wrote:
> I imagine I wrote this code but don't have it on my machine at present. > Can you give a pointer to the Github repo and I'll have a look - but I'm > not very optimistic I can help. > https://github.com/BlueObelisk/cmlxom > Would love to see some projects that use CMLXom - it has a lot of > potential still. > Well, this is why I am working on it. The CDK is using it, and as a consequence Bacting (*) is too. The current CMLXOM has some dependency versions with security issues. I found a workaround for the failing test, to use cml:cml instead of cml:atom. The problem is that it remembers a Stack that does not go with the CML String being parsed. Hence my suspicion of some concurrency. The problem basically is the global variables in CMLNodeFactory. So, with the code base also compiling in GitHub, I will move on next weekend with updating the pom.xml to prepare for releases via Sonatype for Maven Central. Egon -- This year I am stepping down as co-Editor-in-Chief of the Journal of Cheminformatics, because of a conflict of interest with Springer Nature. See https://twitter.com/egonwillighagen/status/1403299501947899907 ----- E.L. Willighagen Department of Bioinformatics - BiGCaT Maastricht University (http://www.bigcat.unimaas.nl/) Twitter/Mastodon: @egonwillighagen <https://twitter.com/egonwillighagen> / @egonw <https://scholar.social/@egonw> Homepage: http://egonw.github.com/ Blog: http://chem-bla-ics.blogspot.com/ PubList: https://www.zotero.org/egonw ORCID: 0000-0001-7542-0286 <http://orcid.org/0000-0001-7542-0286> ImpactStory: https://impactstory.org/u/egonwillighagen
_______________________________________________ Blueobelisk-discuss mailing list Blueobelisk-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss
