basically boinc keeps the hashed authenticator as a cookie, so if that is set 
then you are logged in.  I have a modification I use with WordPress so that you 
can login on the WordPress side and when you get to the BOINC side of the 
website you'll be logged in  (i.e. it creates the WordPress account but uses 
the BOINC login authentication to validate both the WordPress website and the 
BOINC website).

This is probably more than you really need, but basically you want to:

1) check (in PHP) that the user.passwd_hash field = md5($entered_password . 
$entered_username).  Then if that matches set a cookie named "auth" to be the 
user.authenticator field.  BOINC pages should then see this as "logged in" and 
should fill in the appropriate $user settings in PHP so when you move around 
the BOINC pages you will be logged in etc.
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