See <https://ci-beam.apache.org/job/beam_PostCommit_Python39/100/display/redirect?page=changes>
Changes: [noreply] [BEAM-10976] Bundle finalization: Harness and some exec changes (#16980) ------------------------------------------ [...truncated 4.03 MB...] Collecting cloudpickle<3,>=2.0.0 Using cached cloudpickle-2.0.0-py3-none-any.whl (25 kB) Collecting fastavro<2,>=0.23.6 Using cached fastavro-1.4.10-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.5 MB) Requirement already satisfied: grpcio<2,>=1.29.0 in <https://ci-beam.apache.org/job/beam_PostCommit_Python39/ws/src/build/gradleenv/1398941893/lib/python3.9/site-packages> (from apache-beam==2.38.0.dev0) (1.44.0) Collecting hdfs<3.0.0,>=2.1.0 Using cached hdfs-2.6.0-py3-none-any.whl (33 kB) Collecting httplib2<0.20.0,>=0.8 Using cached httplib2-0.19.1-py3-none-any.whl (95 kB) Collecting numpy<1.23.0,>=1.14.3 Using cached numpy-1.22.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.8 MB) Collecting pymongo<4.0.0,>=3.8.0 Using cached pymongo-3.12.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl 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Collecting oauthlib>=3.0.0 Using cached oauthlib-3.2.0-py3-none-any.whl (151 kB) Building wheels for collected packages: apache-beam Building wheel for apache-beam (setup.py): started Building wheel for apache-beam (setup.py): finished with status 'done' Created wheel for apache-beam: filename=apache_beam-2.38.0.dev0-py3-none-any.whl size=2678772 sha256=60a62f306f4091a50397ce50a0b623d9aedd3877ec8f59aa08de52e93a5c17f3 Stored in directory: /home/jenkins/.cache/pip/wheels/82/26/da/eb911cb16584806815500e63d1228ac5f2e615f5fd6e144bf2 Successfully built apache-beam Installing collected packages: wcwidth, pytz, pyasn1, parameterized, docopt, crcmod, certifi, wrapt, websocket-client, urllib3, typing-utils, typing-extensions, tenacity, rsa, pyyaml, python-dateutil, pyparsing, pymysql, pymongo, pyhamcrest, pycparser, pyasn1-modules, psycopg2-binary, proto-plus, pluggy, pbr, orjson, oauthlib, numpy, more-itertools, jmespath, isodate, idna, greenlet, googleapis-common-protos, google-crc32c, fasteners, fastavro, execnet, dill, cloudpickle, charset-normalizer, cachetools, attrs, atomicwrites, sqlalchemy, requests, pydot, pyarrow, pandas, overrides, mock, httplib2, grpcio-status, grpcio-gcp, google-resumable-media, google-auth, freezegun, cffi, botocore, s3transfer, requests-oauthlib, requests_mock, pytest, oauth2client, hdfs, grpc-google-iam-v1, google-api-core, docker, deprecation, cryptography, azure-core, testcontainers, pytest-timeout, pytest-forked, msrest, google-cloud-core, google-apitools, boto3, apache-beam, pytest-xdist, google-cloud-vision, google-cloud-videointelligence, google-cloud-spanner, google-cloud-recommendations-ai, google-cloud-pubsub, google-cloud-language, google-cloud-dlp, google-cloud-datastore, google-cloud-bigtable, google-cloud-bigquery-storage, google-cloud-bigquery, azure-storage-blob, google-cloud-pubsublite Attempting uninstall: pyparsing Found existing installation: pyparsing 3.0.7 Uninstalling pyparsing-3.0.7: Successfully uninstalled pyparsing-3.0.7 Attempting uninstall: pluggy Found existing installation: pluggy 1.0.0 Uninstalling pluggy-1.0.0: Successfully uninstalled pluggy-1.0.0 > Task :sdks:python:container:py39:docker Successfully installed Cython-0.29.28 Keras-Preprocessing-1.1.2 Markdown-3.3.6 PyHamcrest-1.10.1 PyMySQL-1.0.2 PyYAML-6.0 SQLAlchemy-1.4.31 Werkzeug-2.0.3 absl-py-1.0.0 astunparse-1.6.3 atomicwrites-1.4.0 attrs-21.4.0 beautifulsoup4-4.10.0 bs4-0.0.1 cachetools-4.2.4 certifi-2021.10.8 cffi-1.15.0 charset-normalizer-2.0.12 click-8.0.4 cloudpickle-2.0.0 crcmod-1.7 cryptography-36.0.1 deprecation-2.1.0 dill-0.3.1.1 docker-5.0.3 docopt-0.6.2 execnet-1.9.0 fastavro-1.4.9 fasteners-0.17.3 flatbuffers-2.0 freezegun-1.2.0 future-0.18.2 gast-0.5.3 google-api-core-1.31.5 google-api-python-client-2.39.0 google-apitools-0.5.31 google-auth-1.35.0 google-auth-httplib2-0.1.0 google-auth-oauthlib-0.4.6 google-cloud-bigquery-2.34.1 google-cloud-bigquery-storage-2.12.0 google-cloud-bigtable-1.7.0 google-cloud-core-1.7.2 google-cloud-datastore-1.15.3 google-cloud-dlp-3.6.1 google-cloud-language-1.3.0 google-cloud-profiler-3.0.7 google-cloud-pubsub-2.9.0 google-cloud-pubsublite-1.4.0 google-cloud-recommendations-ai-0.2.0 google-cloud-spanner-1.19.1 google-cloud-videointelligence-1.16.1 google-cloud-vision-1.0.0 google-crc32c-1.3.0 google-pasta-0.2.0 google-python-cloud-debugger-2.18 google-resumable-media-2.3.1 googleapis-common-protos-1.55.0 greenlet-1.1.2 grpc-google-iam-v1-0.12.3 grpcio-1.44.0 grpcio-gcp-0.2.2 grpcio-status-1.44.0 guppy3-3.1.2 h5py-3.6.0 hdfs-2.6.0 httplib2-0.19.1 idna-3.3 importlib-metadata-4.11.2 joblib-1.1.0 keras-2.8.0 libclang-13.0.0 libcst-0.4.1 mmh3-3.0.0 mock-2.0.0 more-itertools-8.12.0 mypy-extensions-0.4.3 nltk-3.7 nose-1.3.7 numpy-1.22.2 oauth2client-4.1.3 oauthlib-3.2.0 opt-einsum-3.3.0 orjson-3.6.7 overrides-6.1.0 packaging-21.3 pandas-1.4.1 parameterized-0.7.5 pbr-5.8.1 pluggy-0.13.1 proto-plus-1.20.3 protobuf-3.19.4 psycopg2-binary-2.9.3 py-1.11.0 pyarrow-6.0.1 pyasn1-0.4.8 pyasn1-modules-0.2.8 pycparser-2.21 pydot-1.4.2 pymongo-3.12.3 pyparsing-2.4.7 pytest-4.6.11 pytest-forked-1.4.0 pytest-timeout-1.4.2 pytest-xdist-1.34.0 python-dateutil-2.8.2 python-snappy-0.6.1 pytz-2021.3 regex-2022.3.2 requests-2.27.1 requests-mock-1.9.3 requests-oauthlib-1.3.1 rsa-4.8 scikit-learn-1.0.2 scipy-1.8.0 six-1.16.0 soupsieve-2.3.1 tenacity-5.1.5 tensorboard-2.8.0 tensorboard-data-server-0.6.1 tensorboard-plugin-wit-1.8.1 tensorflow-2.8.0 tensorflow-io-gcs-filesystem-0.24.0 termcolor-1.1.0 testcontainers-3.4.2 tf-estimator-nightly-2.8.0.dev2021122109 threadpoolctl-3.1.0 tqdm-4.63.0 typing-extensions-4.1.1 typing-inspect-0.7.1 typing-utils-0.1.0 uritemplate-4.1.1 urllib3-1.26.8 wcwidth-0.2.5 websocket-client-1.3.1 wrapt-1.13.3 zipp-3.7.0 [91mWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv [0m[91mWARNING: You are using pip version 21.2.4; however, version 22.0.4 is available. You should consider upgrading via the '/usr/local/bin/python -m pip install --upgrade pip' command. [0m[91m[nltk_data] Downloading package stopwords to /root/nltk_data... [0m[91m[nltk_data] Unzipping corpora/stopwords.zip. [0mVerified fast protobuf used. > Task :sdks:python:test-suites:portable:py39:postCommitPy39IT INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b"INFO: The AWS S3 Beam extension was included in this build, but the awsRegion flag was not specified. If you don't plan to use S3, then ignore this message." INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskexecutor.slot.TaskSlotTableImpl markExistingSlotActive' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: Activate slot 6475f509fcac80acc0fcb7f688f30a2c.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskexecutor.TaskExecutor submitTask' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: Received task CHAIN Filter (UnionFixFilter) -> Map (Key Extractor) -> GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) -> Map (Key Extractor) (11/16)#0 (73652c1a61a52f8495c77c1b3dff4858), deploy into slot with allocation id 6475f509fcac80acc0fcb7f688f30a2c.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskmanager.Task transitionState' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: CHAIN Filter (UnionFixFilter) -> Map (Key Extractor) -> GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) -> Map (Key Extractor) (10/16)#0 (1234706681e628958d8f1af0d47c2c2d) switched from CREATED to DEPLOYING.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskmanager.Task doRun' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: Loading JAR files for task CHAIN Filter (UnionFixFilter) -> Map (Key Extractor) -> GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) -> Map (Key Extractor) (10/16)#0 (1234706681e628958d8f1af0d47c2c2d) [DEPLOYING].' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskmanager.Task transitionState' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: CHAIN Filter (UnionFixFilter) -> Map (Key Extractor) -> GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) -> Map (Key Extractor) (10/16)#0 (1234706681e628958d8f1af0d47c2c2d) switched from DEPLOYING to INITIALIZING.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.metrics.groups.TaskMetricGroup getOrAddOperator' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'WARNING: The operator name GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) exceeded the 80 characters length limit and was truncated.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.taskmanager.Task transitionState' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'INFO: CHAIN Filter (UnionFixFilter) -> Map (Key Extractor) -> GroupCombine (GroupCombine at GroupCombine: assert_that/Group/CoGroupByKeyImpl/GroupByKey) -> Map (Key Extractor) (10/16)#0 (1234706681e628958d8f1af0d47c2c2d) switched from INITIALIZING to RUNNING.' INFO apache_beam.utils.subprocess_server:subprocess_server.py:125 b'Mar 09, 2022 12:06:08 AM org.apache.flink.runtime.executiongraph.Execution transitionState' FAILURE: Build failed with an exception. * What went wrong: GC overhead limit exceeded * Try: > Run with --info or --debug option to get more log output. > Run with --scan to get full insights. * Exception is: java.lang.OutOfMemoryError: GC overhead limit exceeded * Get more help at https://help.gradle.org Build step 'Invoke Gradle script' changed build result to FAILURE Build step 'Invoke Gradle script' marked build as failure --------------------------------------------------------------------- To unsubscribe, e-mail: [email protected] For additional commands, e-mail: [email protected]
