See
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/1149/display/redirect?page=changes>
Changes:
[Robert Bradshaw] Work around coders bug on Dataflow.
[Robert Bradshaw] Add a test runner for running multiple pipelines in parallel.
[Robert Bradshaw] Run tests as single Dataflow pipeline.
[Robert Bradshaw] Github hook for dataflow pipelines.
[Robert Bradshaw] Guard dataflow run against GCP credentials.
[Robert Bradshaw] Guard running of precommit against having variables set.
[noreply] Bump github.com/aws/aws-sdk-go-v2/config from 1.18.1 to 1.18.2 in
/sdks
[noreply] Add warning about google-cloud-platform-core dependency change in
#24235
[noreply] Add GetSize implementation for DetectNewPartitions SDF (#23997)
[noreply] Add ZstdCoder to wrap coders with Zstandard compression (#24093)
[noreply] [#24261] Update to objsize 0.6.1 (#24262)
[noreply] Create template for failing tests. (#21728)
[noreply] Add record_metrics argument to utils.BatchElements (#23701)
[noreply] Performance test parameters followup fix (#24291)
------------------------------------------
[...truncated 748.54 KB...]
for dirpath, _, files in os.walk(root):
/usr/lib/python3.9/os.py:418: in _walk
yield from _walk(new_path, topdown, onerror, followlinks)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
top = '/tmp/beam-pipeline-tempnfbw9t56', topdown = True, onerror = None
followlinks = False
def _walk(top, topdown, onerror, followlinks):
dirs = []
nondirs = []
walk_dirs = []
# We may not have read permission for top, in which case we can't
# get a list of the files the directory contains. os.walk
# always suppressed the exception then, rather than blow up for a
# minor reason when (say) a thousand readable directories are still
# left to visit. That logic is copied here.
try:
# Note that scandir is global in this module due
# to earlier import-*.
scandir_it = scandir(top)
except OSError as error:
if onerror is not None:
onerror(error)
return
with scandir_it:
while True:
try:
try:
> entry = next(scandir_it)
E Failed: Timeout >600.0s [while running
'WriteToText/Write/WriteImpl/PreFinalize']
/usr/lib/python3.9/os.py:367: Failed
----------------------------- Captured stderr call -----------------------------
+++++++++++++++++++++++++++++++++++ Timeout ++++++++++++++++++++++++++++++++++++
~~~~~~~~~~~~~~~~~~~~ Stack of Thread-167 (140588530583296) ~~~~~~~~~~~~~~~~~~~~~
File "/usr/lib/python3.9/threading.py", line 930, in _bootstrap
self._bootstrap_inner()
File "/usr/lib/python3.9/threading.py", line 973, in _bootstrap_inner
self.run()
File
"<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/runners/worker/data_plane.py";,>
line 226, in run
while not self._finished.wait(next_call - time.time()):
File "/usr/lib/python3.9/threading.py", line 574, in wait
signaled = self._cond.wait(timeout)
File "/usr/lib/python3.9/threading.py", line 316, in wait
gotit = waiter.acquire(True, timeout)
+++++++++++++++++++++++++++++++++++ Timeout ++++++++++++++++++++++++++++++++++++
------------------------------ Captured log call -------------------------------
INFO root:pipeline.py:188 Missing pipeline option (runner). Executing
pipeline using the default runner: DirectRunner.
INFO root:environments.py:376 Default Python SDK image for environment is
apache/beam_python3.9_sdk:2.44.0.dev
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function annotate_downstream_side_inputs at
0x7fdd315fc700> ====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function fix_side_input_pcoll_coders at 0x7fdd315fc820>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function pack_combiners at 0x7fdd315fcd30>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function lift_combiners at 0x7fdd315fcdc0>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function expand_sdf at 0x7fdd315fcf70>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function expand_gbk at 0x7fdd3160e040>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function sink_flattens at 0x7fdd3160e160>
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INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function greedily_fuse at 0x7fdd3160e1f0>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function read_to_impulse at 0x7fdd3160e280>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function impulse_to_input at 0x7fdd3160e310>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function sort_stages at 0x7fdd3160e550>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function add_impulse_to_dangling_transforms at
0x7fdd3160e670> ====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function setup_timer_mapping at 0x7fdd3160e4c0>
====================
INFO
apache_beam.runners.portability.fn_api_runner.translations:translations.py:714
==================== <function populate_data_channel_coders at 0x7fdd3160e5e0>
====================
INFO apache_beam.runners.worker.statecache:statecache.py:234 Creating state
cache with size 104857600
INFO
apache_beam.runners.portability.fn_api_runner.worker_handlers:worker_handlers.py:903
Created Worker handler
<apache_beam.runners.portability.fn_api_runner.worker_handlers.EmbeddedWorkerHandler
object at 0x7fdd68e5cb80> for environment
ref_Environment_default_environment_1 (beam:env:embedded_python:v1, b'')
=============================== warnings summary ===============================
../../build/gradleenv/1398941893/lib/python3.9/site-packages/hdfs/config.py:15
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/build/gradleenv/1398941893/lib/python3.9/site-packages/hdfs/config.py>:15:
DeprecationWarning: the imp module is deprecated in favour of importlib; see
the module's documentation for alternative uses
from imp import load_source
../../build/gradleenv/1398941893/lib/python3.9/site-packages/tenacity/_asyncio.py:42
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/build/gradleenv/1398941893/lib/python3.9/site-packages/tenacity/_asyncio.py>:42:
DeprecationWarning: "@coroutine" decorator is deprecated since Python 3.8, use
"async def" instead
def call(self, fn, *args, **kwargs):
apache_beam/typehints/pandas_type_compatibility_test.py:67
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/typehints/pandas_type_compatibility_test.py>:67:
FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas
in a future version. Use pandas.Index with the appropriate dtype instead.
}).set_index(pd.Int64Index(range(123, 223), name='an_index')),
apache_beam/typehints/pandas_type_compatibility_test.py:90
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/typehints/pandas_type_compatibility_test.py>:90:
FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas
in a future version. Use pandas.Index with the appropriate dtype instead.
pd.Int64Index(range(123, 223), name='an_index'),
apache_beam/typehints/pandas_type_compatibility_test.py:91
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/typehints/pandas_type_compatibility_test.py>:91:
FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas
in a future version. Use pandas.Index with the appropriate dtype instead.
pd.Int64Index(range(475, 575), name='another_index'),
apache_beam/examples/complete/game/hourly_team_score_it_test.py::HourlyTeamScoreIT::test_hourly_team_score_output_checksum_on_small_input
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/tests/utils.py>:63:
PendingDeprecationWarning: Client.dataset is deprecated and will be removed in
a future version. Use a string like 'my_project.my_dataset' or a
cloud.google.bigquery.DatasetReference object, instead.
dataset_ref = client.dataset(unique_dataset_name, project=project)
apache_beam/examples/complete/game/hourly_team_score_it_test.py::HourlyTeamScoreIT::test_hourly_team_score_output_checksum_on_small_input
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1992:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
is_streaming_pipeline = p.options.view_as(StandardOptions).streaming
apache_beam/examples/complete/game/hourly_team_score_it_test.py::HourlyTeamScoreIT::test_hourly_team_score_output_checksum_on_small_input
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1998:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
experiments = p.options.view_as(DebugOptions).experiments or []
apache_beam/examples/complete/game/hourly_team_score_it_test.py::HourlyTeamScoreIT::test_hourly_team_score_output_checksum_on_small_input
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery_file_loads.py>:1149:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
temp_location = p.options.view_as(GoogleCloudOptions).temp_location
apache_beam/examples/complete/game/hourly_team_score_it_test.py::HourlyTeamScoreIT::test_hourly_team_score_output_checksum_on_small_input
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery_file_loads.py>:1151:
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References to <pipeline>.options will not be supported
p.options.view_as(GoogleCloudOptions).job_name or 'AUTOMATIC_JOB_NAME')
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
apache_beam/examples/dataframe/flight_delays_it_test.py::FlightDelaysTest::test_flight_delays
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:2485:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
temp_location = pcoll.pipeline.options.view_as(
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
apache_beam/examples/dataframe/flight_delays_it_test.py::FlightDelaysTest::test_flight_delays
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:2487:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
job_name = pcoll.pipeline.options.view_as(GoogleCloudOptions).job_name
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_side_input_it_test.py::BigQuerySideInputIT::test_bigquery_side_input_it
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
apache_beam/examples/dataframe/flight_delays_it_test.py::FlightDelaysTest::test_flight_delays
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:2511:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
pipeline_options=pcoll.pipeline.options,
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery.py>:1988:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
self.table_reference.projectId = pcoll.pipeline.options.view_as(
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/bigquery_file_loads.py>:1142:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
self.project = self.project or p.options.view_as(GoogleCloudOptions).project
apache_beam/examples/cookbook/bigquery_tornadoes_it_test.py::BigqueryTornadoesIT::test_bigquery_tornadoes_it
apache_beam/examples/cookbook/filters_test.py::FiltersTest::test_filters_output_bigquery_matcher
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/gcp/tests/utils.py>:100:
PendingDeprecationWarning: Client.dataset is deprecated and will be removed in
a future version. Use a string like 'my_project.my_dataset' or a
cloud.google.bigquery.DatasetReference object, instead.
table_ref = client.dataset(dataset_id).table(table_id)
apache_beam/examples/dataframe/flight_delays_it_test.py: 46 warnings
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/examples/dataframe/flight_delays.py>:47:
FutureWarning: Dropping of nuisance columns in DataFrame reductions (with
'numeric_only=None') is deprecated; in a future version this will raise
TypeError. Select only valid columns before calling the reduction.
return airline_df[at_top_airports].mean()
apache_beam/examples/dataframe/flight_delays_it_test.py::FlightDelaysTest::test_flight_delays
apache_beam/examples/dataframe/wordcount_test.py::WordCountTest::test_basics
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/dataframe/io.py>:659:
FutureWarning: WriteToFiles is experimental.
return pcoll | fileio.WriteToFiles(
apache_beam/examples/dataframe/flight_delays_it_test.py::FlightDelaysTest::test_flight_delays
apache_beam/examples/dataframe/wordcount_test.py::WordCountTest::test_basics
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/apache_beam/io/fileio.py>:590:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
p.options.view_as(GoogleCloudOptions).temp_location or
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
- generated xml file:
<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/pytest_postCommitExamples-direct-py39.xml>
-
=========================== short test summary info ============================
FAILED
apache_beam/examples/complete/juliaset/juliaset/juliaset_test.py::JuliaSetTest::test_output_file_format
- Failed: Timeout >600.0s [while running
'WriteToText/Write/WriteImpl/PreFinalize']
= 1 failed, 21 passed, 6 skipped, 6718 deselected, 89 warnings in 822.05s
(0:13:42) =
> Task :sdks:python:test-suites:direct:py39:examples FAILED
FAILURE: Build completed with 4 failures.
1: Task failed with an exception.
-----------
* Where:
Script
'<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/test-suites/direct/common.gradle'>
line: 92
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py37:examples'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
==============================================================================
2: Task failed with an exception.
-----------
* Where:
Script
'<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/test-suites/direct/common.gradle'>
line: 92
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py38:examples'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
==============================================================================
3: Task failed with an exception.
-----------
* Where:
Script
'<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/test-suites/direct/common.gradle'>
line: 92
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py310:examples'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
==============================================================================
4: Task failed with an exception.
-----------
* Where:
Script
'<https://ci-beam.apache.org/job/beam_PostCommit_Python_Examples_Direct/ws/src/sdks/python/test-suites/direct/common.gradle'>
line: 92
* What went wrong:
Execution failed for task ':sdks:python:test-suites:direct:py39:examples'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
==============================================================================
* Get more help at https://help.gradle.org
BUILD FAILED in 15m 18s
24 actionable tasks: 18 executed, 4 from cache, 2 up-to-date
Publishing build scan...
https://gradle.com/s/huqbzguy646i4
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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