See
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/4/display/redirect?page=changes>
Changes:
[echauchot] [BEAM-9065] Reset MetricsContainerStepMapAccumulator upon
initialization
[github] Update release guide with extended information.
[github] Add link to mass comment script
[github] Fix typo
[github] Address comments
[github] Update twine install details.
[kirillkozlov] Create initial DataStoreV1Table
[kirillkozlov] Added tests
[kirillkozlov] Implement getTableStatistics
[kirillkozlov] buildIOWriter
[kirillkozlov] Read other types
[kirillkozlov] Better conversion, support complex types
[kirillkozlov] Store DataStore key as VARBINARY
[kirillkozlov] Wrap DoFns in PTransforms
[kirillkozlov] Table property for specifying key field
[kirillkozlov] JavaDoc
[kirillkozlov] Infer schema for RowToEntity
[kirillkozlov] Better conversion performance
[kirillkozlov] Mark Table as `Internal` and `Experimental`
[kirillkozlov] Review changes
[kirillkozlov] Add IT that does not rely on SQL
[kirillkozlov] fix style
[github] cleanup typo
[github] [BEAM-3419, BEAM-9173] Add TODO comment
[iemejia] [BEAM-9172] Add missing parameter to Nexmark CI execution for Flink
[github] Chnage dataflow container version
[hannahjiang] [BEAM-9084] cleaning up docker image tag
[iemejia] Make Spark use of batch based invocation in Nexmark CI jobs cleaner
[ehudm] Update beam website for 2.18.0
[apilloud] [BEAM-9027] Unparse LIKE as binary operator
[github] Blog post for release 2.18.0 (#10575)
[kcweaver] upgrade auto-value to version 1.7
[kcweaver] [BEAM-9149] Add SQL query parameters to public API and enable
positional
[bhulette] [BEAM-9072] [SQL] Primitive types should fall through (#10681)
[iemejia] [BEAM-9170] Unify Jenkins job names related to Java 11 testing
------------------------------------------
[...truncated 158.66 KB...]
severity: ERROR
short_description: "Column dropped"
reason {
type: FEATURE_TYPE_LOW_FRACTION_PRESENT
short_description: "Column dropped"
description: "The feature was present in fewer examples than expected."
}
path {
step: "tips"
}
}
}
anomaly_info {
key: "trip_miles"
value {
description: "The feature was present in fewer examples than expected."
severity: ERROR
short_description: "Column dropped"
reason {
type: FEATURE_TYPE_LOW_FRACTION_PRESENT
short_description: "Column dropped"
description: "The feature was present in fewer examples than expected."
}
path {
step: "trip_miles"
}
}
}
anomaly_info {
key: "trip_seconds"
value {
description: "The feature was present in fewer examples than expected."
severity: ERROR
short_description: "Column dropped"
reason {
type: FEATURE_TYPE_LOW_FRACTION_PRESENT
short_description: "Column dropped"
description: "The feature was present in fewer examples than expected."
}
path {
step: "trip_seconds"
}
}
}
anomaly_name_format: SERIALIZED_PATH
Writing anomalies to anomalies path.
Preprocessing train data...
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/apache_beam/__init__.py>:84:
UserWarning: You are using Apache Beam with Python 2. New releases of Apache
Beam will soon support Python 3 only.
'You are using Apache Beam with Python 2. '
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/beam/common.py>:51:
The name tf.ConfigProto is deprecated. Please use tf.compat.v1.ConfigProto
instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py>:283:
The name tf.SparseTensorValue is deprecated. Please use
tf.compat.v1.SparseTensorValue instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:313:
The name tf.VarLenFeature is deprecated. Please use tf.io.VarLenFeature
instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:63:
The name tf.SparseFeature is deprecated. Please use tf.io.SparseFeature
instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/tf_metadata/schema_utils.py>:110:
The name tf.FixedLenFeature is deprecated. Please use tf.io.FixedLenFeature
instead.
preprocess.py:149: FutureWarning: _ReadFromBigQuery is experimental.
| 'Measure time: start' >> beam.ParDo(MeasureTime(namespace)))
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/apache_beam/io/gcp/bigquery.py>:1605:
BeamDeprecationWarning: options is deprecated since First stable release.
References to <pipeline>.options will not be supported
temp_location = pcoll.pipeline.options.view_as(
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/mappers.py>:207:
where (from tensorflow.python.ops.array_ops) is deprecated and will be removed
in a future version.
Instructions for updating:
Use tf.where in 2.0, which has the same broadcast rule as np.where
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/mappers.py>:207:
where (from tensorflow.python.ops.array_ops) is deprecated and will be removed
in a future version.
Instructions for updating:
Use tf.where in 2.0, which has the same broadcast rule as np.where
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/mappers.py>:1027:
to_int64 (from tensorflow.python.ops.math_ops) is deprecated and will be
removed in a future version.
Instructions for updating:
Use `tf.cast` instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/mappers.py>:1027:
to_int64 (from tensorflow.python.ops.math_ops) is deprecated and will be
removed in a future version.
Instructions for updating:
Use `tf.cast` instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py>:240:
The name tf.gfile.MakeDirs is deprecated. Please use tf.io.gfile.makedirs
instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/beam/impl.py>:240:
The name tf.gfile.MakeDirs is deprecated. Please use tf.io.gfile.makedirs
instead.
2020-01-24 14:44:40.368638: I
tensorflow/core/platform/cpu_feature_guard.cc:142] Your CPU supports
instructions that this TensorFlow binary was not compiled to use: AVX2 FMA
2020-01-24 14:44:40.379968: I
tensorflow/core/platform/profile_utils/cpu_utils.cc:94] CPU Frequency:
2300000000 Hz
2020-01-24 14:44:40.381483: I tensorflow/compiler/xla/service/service.cc:168]
XLA service 0x8073c60 executing computations on platform Host. Devices:
2020-01-24 14:44:40.381526: I tensorflow/compiler/xla/service/service.cc:175]
StreamExecutor device (0): <undefined>, <undefined>
2020-01-24 14:44:40.397971: W
tensorflow/compiler/jit/mark_for_compilation_pass.cc:1412] (One-time warning):
Not using XLA:CPU for cluster because envvar
TF_XLA_FLAGS=--tf_xla_cpu_global_jit was not set. If you want XLA:CPU, either
set that envvar, or use experimental_jit_scope to enable XLA:CPU. To confirm
that XLA is active, pass --vmodule=xla_compilation_cache=1 (as a proper
command-line flag, not via TF_XLA_FLAGS) or set the envvar
XLA_FLAGS=--xla_hlo_profile.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/saved/saved_transform_io.py>:378:
The name tf.saved_model.signature_def_utils.predict_signature_def is
deprecated. Please use
tf.compat.v1.saved_model.signature_def_utils.predict_signature_def instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/saved/saved_transform_io.py>:378:
The name tf.saved_model.signature_def_utils.predict_signature_def is
deprecated. Please use
tf.compat.v1.saved_model.signature_def_utils.predict_signature_def instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow/python/saved_model/signature_def_utils_impl.py>:201:
build_tensor_info (from tensorflow.python.saved_model.utils_impl) is
deprecated and will be removed in a future version.
Instructions for updating:
This function will only be available through the v1 compatibility library as
tf.compat.v1.saved_model.utils.build_tensor_info or
tf.compat.v1.saved_model.build_tensor_info.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow/python/saved_model/signature_def_utils_impl.py>:201:
build_tensor_info (from tensorflow.python.saved_model.utils_impl) is
deprecated and will be removed in a future version.
Instructions for updating:
This function will only be available through the v1 compatibility library as
tf.compat.v1.saved_model.utils.build_tensor_info or
tf.compat.v1.saved_model.build_tensor_info.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/saved/saved_transform_io.py>:380:
The name tf.saved_model.builder.SavedModelBuilder is deprecated. Please use
tf.compat.v1.saved_model.builder.SavedModelBuilder instead.
WARNING:tensorflow:From
<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/tensorflow_transform/saved/saved_transform_io.py>:380:
The name tf.saved_model.builder.SavedModelBuilder is deprecated. Please use
tf.compat.v1.saved_model.builder.SavedModelBuilder instead.
INFO:tensorflow:Assets added to graph.
INFO:tensorflow:Assets added to graph.
INFO:tensorflow:No assets to write.
INFO:tensorflow:No assets to write.
INFO:tensorflow:SavedModel written to:
gs://temp-storage-for-perf-tests/chicago-taxi/chicago-taxi-tfdv-20200124-143531/chicago_taxi_output/tft_output/tftransform_tmp/6dc69ad129744da787ca68d172be2f65/saved_model.pb
INFO:tensorflow:SavedModel written to:
gs://temp-storage-for-perf-tests/chicago-taxi/chicago-taxi-tfdv-20200124-143531/chicago_taxi_output/tft_output/tftransform_tmp/6dc69ad129744da787ca68d172be2f65/saved_model.pb
INFO:tensorflow:Assets added to graph.
INFO:tensorflow:Assets added to graph.
INFO:tensorflow:No assets to write.
INFO:tensorflow:No assets to write.
INFO:tensorflow:SavedModel written to:
gs://temp-storage-for-perf-tests/chicago-taxi/chicago-taxi-tfdv-20200124-143531/chicago_taxi_output/tft_output/tftransform_tmp/0b25bffbf25e4e3fbb272a4010a3b8a1/saved_model.pb
INFO:tensorflow:SavedModel written to:
gs://temp-storage-for-perf-tests/chicago-taxi/chicago-taxi-tfdv-20200124-143531/chicago_taxi_output/tft_output/tftransform_tmp/0b25bffbf25e4e3fbb272a4010a3b8a1/saved_model.pb
warning: sdist: standard file not found: should have one of README, README.rst,
README.txt, README.md
warning: check: missing required meta-data: url
warning: check: missing meta-data: either (author and author_email) or
(maintainer and maintainer_email) must be supplied
ERROR:root:java.lang.RuntimeException: Error received from SDK harness for
instruction 61: Traceback (most recent call last):
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 167, in _execute
response = task()
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 223, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 352, in do_instruction
request.instruction_id)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 386, in process_bundle
bundle_processor.process_bundle(instruction_id))
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/bundle_processor.py",
line 812, in process_bundle
data.transform_id].process_encoded(data.data)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/bundle_processor.py",
line 205, in process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 302, in
apache_beam.runners.worker.operations.Operation.output
def output(self, windowed_value, output_index=0):
File "apache_beam/runners/worker/operations.py", line 304, in
apache_beam.runners.worker.operations.Operation.output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "apache_beam/runners/worker/operations.py", line 178, in
apache_beam.runners.worker.operations.SingletonConsumerSet.receive
self.consumer.process(windowed_value)
File "apache_beam/runners/worker/operations.py", line 657, in
apache_beam.runners.worker.operations.DoOperation.process
with self.scoped_process_state:
File "apache_beam/runners/worker/operations.py", line 658, in
apache_beam.runners.worker.operations.DoOperation.process
delayed_application = self.dofn_receiver.receive(o)
File "apache_beam/runners/common.py", line 878, in
apache_beam.runners.common.DoFnRunner.receive
self.process(windowed_value)
File "apache_beam/runners/common.py", line 885, in
apache_beam.runners.common.DoFnRunner.process
self._reraise_augmented(exn)
File "apache_beam/runners/common.py", line 956, in
apache_beam.runners.common.DoFnRunner._reraise_augmented
raise_with_traceback(new_exn)
File "apache_beam/runners/common.py", line 883, in
apache_beam.runners.common.DoFnRunner.process
return self.do_fn_invoker.invoke_process(windowed_value)
File "apache_beam/runners/common.py", line 667, in
apache_beam.runners.common.PerWindowInvoker.invoke_process
self._invoke_process_per_window(
File "apache_beam/runners/common.py", line 748, in
apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
windowed_value, self.process_method(*args_for_process))
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/iobase.py", line
1083, in process
return [window.TimestampedValue(writer.close(), timestamp.MAX_TIMESTAMP)]
File
"/usr/local/lib/python2.7/site-packages/apache_beam/io/filebasedsink.py", line
401, in close
self.sink.close(self.temp_handle)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/io/filebasedsink.py", line
157, in close
file_handle.close()
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/filesystemio.py",
line 219, in close
self._uploader.finish()
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/gcp/gcsio.py",
line 593, in finish
raise self._upload_thread.last_error # pylint: disable=raising-bad-type
AttributeError: 'module' object has no attribute '_strptime' [while running
'Analyze/VocabularyWrite[compute_and_apply_vocabulary/vocabulary]/WriteToFile/Write/WriteImpl/WriteBundles']
Traceback (most recent call last):
File "preprocess.py", line 261, in <module>
main()
File "preprocess.py", line 256, in main
project=known_args.metric_reporting_project
File "preprocess.py", line 184, in transform_data
result.wait_until_finish()
File
"<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/build/gradleenv/1866363813/local/lib/python2.7/site-packages/apache_beam/runners/portability/portable_runner.py";,>
line 455, in wait_until_finish
self._job_id, self._state, self._last_error_message()))
RuntimeError: Pipeline
chicago-taxi-tfdv-20200124-143531_865998aa-81e1-4c52-aeeb-5494e916e7e9 failed
in state FAILED: java.lang.RuntimeException: Error received from SDK harness
for instruction 61: Traceback (most recent call last):
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 167, in _execute
response = task()
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 223, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 352, in do_instruction
request.instruction_id)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/sdk_worker.py",
line 386, in process_bundle
bundle_processor.process_bundle(instruction_id))
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/bundle_processor.py",
line 812, in process_bundle
data.transform_id].process_encoded(data.data)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/runners/worker/bundle_processor.py",
line 205, in process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 302, in
apache_beam.runners.worker.operations.Operation.output
def output(self, windowed_value, output_index=0):
File "apache_beam/runners/worker/operations.py", line 304, in
apache_beam.runners.worker.operations.Operation.output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "apache_beam/runners/worker/operations.py", line 178, in
apache_beam.runners.worker.operations.SingletonConsumerSet.receive
self.consumer.process(windowed_value)
File "apache_beam/runners/worker/operations.py", line 657, in
apache_beam.runners.worker.operations.DoOperation.process
with self.scoped_process_state:
File "apache_beam/runners/worker/operations.py", line 658, in
apache_beam.runners.worker.operations.DoOperation.process
delayed_application = self.dofn_receiver.receive(o)
File "apache_beam/runners/common.py", line 878, in
apache_beam.runners.common.DoFnRunner.receive
self.process(windowed_value)
File "apache_beam/runners/common.py", line 885, in
apache_beam.runners.common.DoFnRunner.process
self._reraise_augmented(exn)
File "apache_beam/runners/common.py", line 956, in
apache_beam.runners.common.DoFnRunner._reraise_augmented
raise_with_traceback(new_exn)
File "apache_beam/runners/common.py", line 883, in
apache_beam.runners.common.DoFnRunner.process
return self.do_fn_invoker.invoke_process(windowed_value)
File "apache_beam/runners/common.py", line 667, in
apache_beam.runners.common.PerWindowInvoker.invoke_process
self._invoke_process_per_window(
File "apache_beam/runners/common.py", line 748, in
apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
windowed_value, self.process_method(*args_for_process))
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/iobase.py", line
1083, in process
return [window.TimestampedValue(writer.close(), timestamp.MAX_TIMESTAMP)]
File
"/usr/local/lib/python2.7/site-packages/apache_beam/io/filebasedsink.py", line
401, in close
self.sink.close(self.temp_handle)
File
"/usr/local/lib/python2.7/site-packages/apache_beam/io/filebasedsink.py", line
157, in close
file_handle.close()
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/filesystemio.py",
line 219, in close
self._uploader.finish()
File "/usr/local/lib/python2.7/site-packages/apache_beam/io/gcp/gcsio.py",
line 593, in finish
raise self._upload_thread.last_error # pylint: disable=raising-bad-type
AttributeError: 'module' object has no attribute '_strptime' [while running
'Analyze/VocabularyWrite[compute_and_apply_vocabulary/vocabulary]/WriteToFile/Write/WriteImpl/WriteBundles']
> Task :sdks:python:test-suites:portable:py2:chicagoTaxiExample FAILED
FAILURE: Build failed with an exception.
* Where:
Build file
'<https://builds.apache.org/job/beam_PostCommit_Python_Chicago_Taxi_Flink/ws/src/sdks/python/test-suites/portable/py2/build.gradle'>
line: 197
* What went wrong:
Execution failed for task
':sdks:python:test-suites:portable:py2:chicagoTaxiExample'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug
option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with
Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See
https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 13m 7s
6 actionable tasks: 5 executed, 1 up-to-date
Publishing build scan...
https://gradle.com/s/c37vankaypoew
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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