See 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/9/display/redirect?page=changes>

Changes:

[noreply] [BEAM-10250]: Update io_matrix with new SplunkIO (#11998)

[noreply] Remove a hack used to retrieve schematized data from HL7v2 messages, …

[daniel.o.programmer] [BEAM-10235] Adding a CountElms transform to the Go SDK.


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[...truncated 1.52 MB...]
apache_beam/io/fileio_test.py:424
  
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 FutureWarning: MatchFiles is experimental.
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apache_beam/io/fileio_test.py:424
  
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apache_beam/io/fileio_test.py:431
  
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 FutureWarning: MatchFiles is experimental.
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apache_beam/io/fileio_test.py:431
  
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 FutureWarning: ReadMatches is experimental.
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apache_beam/io/fileio_test.py:646
  
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 FutureWarning: WriteToFiles is experimental.
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apache_beam/io/fileio_test.py:653
  
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apache_beam/io/fileio_test.py:659
  
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 FutureWarning: MatchFiles is experimental.
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apache_beam/io/mongodbio_test.py:309
  
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 FutureWarning: WriteToMongoDB is experimental.
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apache_beam/io/fileio_test.py:172
  
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apache_beam/io/fileio_test.py:172
  
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apache_beam/io/fileio_test.py:589
  
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 FutureWarning: WriteToFiles is experimental.
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apache_beam/io/fileio_test.py:593
  
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 FutureWarning: MatchFiles is experimental.
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apache_beam/io/fileio_test.py:600
  
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apache_beam/io/fileio_test.py:389
  
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apache_beam/io/fileio_test.py:397
  
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apache_beam/io/fileio_test.py:397
  
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apache_beam/io/fileio_test.py:78
  
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apache_beam/io/fileio_test.py:272
  
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 FutureWarning: ReadMatches is experimental.
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apache_beam/io/parquetio_test.py:412
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/io/parquetio_test.py>:412:
 FutureWarning: The parameter chunksize is deprecated for 
pyarrow.Table.to_batches as of 0.15, please use the parameter max_chunksize 
instead
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apache_beam/io/fileio_test.py:452
  
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 FutureWarning: WriteToFiles is experimental.
    write_transform = beam.io.fileio.WriteToFiles(path=dir)

apache_beam/io/parquetio_test.py:374
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/io/parquetio_test.py>:374:
 FutureWarning: The parameter chunksize is deprecated for 
pyarrow.Table.to_batches as of 0.15, please use the parameter max_chunksize 
instead
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apache_beam/io/parquetio_test.py:364
  
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 FutureWarning: The parameter chunksize is deprecated for 
pyarrow.Table.to_batches as of 0.15, please use the parameter max_chunksize 
instead
    count=12000).to_batches(chunksize=1000)

/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
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/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
/usr/lib/python3.7/unittest/case.py:1143
  /usr/lib/python3.7/unittest/case.py:1143: DeprecationWarning: 
assertDictContainsSubset is deprecated
    DeprecationWarning)

apache_beam/runners/interactive/interactive_beam.py:388
apache_beam/runners/interactive/interactive_beam.py:388
  
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 BeamDeprecationWarning: options is deprecated since First stable release. 
References to <pipeline>.options will not be supported
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apache_beam/runners/interactive/interactive_beam.py:411
apache_beam/runners/interactive/interactive_beam.py:411
  
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 BeamDeprecationWarning: options is deprecated since First stable release. 
References to <pipeline>.options will not be supported
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target/.tox-py37-cython/py37-cython/lib/python3.7/site-packages/hamcrest/library/collection/issequence_containinginorder.py:95
  
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DeprecationWarning)

apache_beam/transforms/util_test.py:655
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/transforms/util_test.py>:655:
 FutureWarning: GroupIntoBatches is experimental.
    | util.GroupIntoBatches(GroupIntoBatchesTest.BATCH_SIZE)

-- Docs: https://docs.pytest.org/en/latest/warnings.html
- generated xml file: 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/pytest_py37-cython.xml>
 -
=========== 2657 passed, 594 skipped, 198 warnings in 487.27 seconds ===========
============================= test session starts ==============================
platform linux -- Python 3.7.3, pytest-4.6.11, py-1.8.1, pluggy-0.13.1
cachedir: target/.tox-py37-cython/py37-cython/.pytest_cache
rootdir: 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python,>
 inifile: pytest.ini
plugins: requests-mock-1.8.0, xdist-1.32.0, forked-1.1.3, timeout-1.3.4
timeout: 600.0s
timeout method: signal
timeout func_only: False
collected 3308 items / 3250 deselected / 4 skipped / 54 selected

apache_beam/coders/fast_coders_test.py ............................      [ 48%]
apache_beam/coders/slow_coders_test.py ............................      [ 96%]
apache_beam/io/gcp/tests/bigquery_matcher_test.py s                      [ 98%]
apache_beam/runners/portability/stager_test.py .                         [100%]

=============================== warnings summary ===============================
apache_beam/typehints/typehints.py:685
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/typehints/typehints.py>:685:
 DeprecationWarning: Using or importing the ABCs from 'collections' instead of 
from 'collections.abc' is deprecated, and in 3.8 it will stop working
    if not isinstance(type_params, collections.Iterable):

apache_beam/typehints/typehints.py:524
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/typehints/typehints.py>:524:
 DeprecationWarning: Using or importing the ABCs from 'collections' instead of 
from 'collections.abc' is deprecated, and in 3.8 it will stop working
    if not isinstance(type_params, (collections.Sequence, set)):

apache_beam/io/vcfio.py:50
  
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/apache_beam/io/vcfio.py>:50:
 UserWarning: VCF IO will support Python 3 after migration to Nucleus, see: 
BEAM-5628.
    "VCF IO will support Python 3 after migration to Nucleus, "

-- Docs: https://docs.pytest.org/en/latest/warnings.html
- generated xml file: 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/pytest_py37-cython_no_xdist.xml>
 -
====== 57 passed, 5 skipped, 3250 deselected, 3 warnings in 9.54 seconds =======
py37-cython run-test-post: commands[0] | 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/test-suites/tox/py37/build/srcs/sdks/python/scripts/run_tox_cleanup.sh>
___________________________________ summary ____________________________________
  py37-cython: commands succeeded
  congratulations :)

> Task :sdks:python:test-suites:tox:py37:preCommitPy37

> Task :sdks:python:test-suites:dataflow:py37:preCommitIT_streaming_V2
WARNING:apache_beam.runners.dataflow.dataflow_runner:Timing out on waiting for 
job 2020-06-13_04_52_26-3689134436181902486 after 360 seconds
DEBUG:google.auth.transport._http_client:Making request: GET 
http://169.254.169.254
DEBUG:google.auth.transport._http_client:Making request: GET 
http://metadata.google.internal/computeMetadata/v1/project/project-id
DEBUG:google.auth.transport.requests:Making request: GET 
http://metadata.google.internal/computeMetadata/v1/instance/service-accounts/default/?recursive=true
DEBUG:urllib3.connectionpool:Starting new HTTP connection (1): 
metadata.google.internal:80
DEBUG:urllib3.connectionpool:http://metadata.google.internal:80 "GET 
/computeMetadata/v1/instance/service-accounts/default/?recursive=true HTTP/1.1" 
200 144
DEBUG:google.auth.transport.requests:Making request: GET 
http://metadata.google.internal/computeMetadata/v1/instance/service-accounts/[email protected]/token
DEBUG:urllib3.connectionpool:http://metadata.google.internal:80 "GET 
/computeMetadata/v1/instance/service-accounts/[email protected]/token
 HTTP/1.1" 200 192

> Task :sdks:python:test-suites:dataflow:py2:preCommitIT_streaming_V2
test_streaming_wordcount_it 
(apache_beam.examples.streaming_wordcount_it_test.StreamingWordCountIT) ... ok

----------------------------------------------------------------------
XML: nosetests-preCommitIT-df-py27.xml
----------------------------------------------------------------------
XML: 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/nosetests.xml>
----------------------------------------------------------------------
Ran 1 test in 559.045s

OK
Worker logs: 
https://console.cloud.google.com/dataflow/jobs/us-central1/2020-06-13_04_51_48-8244504820284315744?project=apache-beam-testing

> Task :sdks:python:test-suites:dataflow:py2:preCommitIT_V2

> Task :sdks:python:test-suites:dataflow:py37:preCommitIT_streaming_V2
Worker logs: 
https://console.cloud.google.com/dataflow/jobs/us-central1/2020-06-13_04_52_26-3689134436181902486?project=apache-beam-testing
test_streaming_wordcount_it 
(apache_beam.examples.streaming_wordcount_it_test.StreamingWordCountIT) ... ok

----------------------------------------------------------------------
XML: nosetests-preCommitIT-df-py37.xml
----------------------------------------------------------------------
XML: 
<https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/ws/src/sdks/python/nosetests.xml>
----------------------------------------------------------------------
Ran 1 test in 580.533s

OK

> Task :sdks:python:test-suites:dataflow:py37:preCommitIT_V2

FAILURE: Build completed with 2 failures.

1: Task failed with an exception.
-----------
* What went wrong:
Execution failed for task ':sdks:python:test-suites:tox:py2:testPy2Cloud'.
> Process 'command 'sh'' finished with non-zero exit value 1

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug 
option to get more log output. Run with --scan to get full insights.
==============================================================================

2: Task failed with an exception.
-----------
* What went wrong:
Execution failed for task ':sdks:python:test-suites:tox:py38:testPy38Cython'.
> Process 'command 'sh'' finished with non-zero exit value 1

* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug 
option to get more log output. Run with --scan to get full insights.
==============================================================================

* Get more help at https://help.gradle.org

Deprecated Gradle features were used in this build, making it incompatible with 
Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See 
https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings

BUILD FAILED in 39m 19s
89 actionable tasks: 71 executed, 18 from cache

Publishing build scan...
https://gradle.com/s/vkutijda6jux2

Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure

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