See
<https://ci-beam.apache.org/job/beam_PreCommit_Python2_PVR_Flink_Cron/1103/display/redirect?page=changes>
Changes:
[nielm] Remove usage of jdk-internal NotNull annotation
[srohde] Remove passthrough_pcollection_output_ids and
[srohde] yield none, pvalue for single output transforms
[Robert Burke] [BEAM-9615] Add Row coder functions.
[Robert Burke] !fixup go version restrictions on shift.
[noreply] !fixup address comments & go1.12 compiler error
[ajamato] [BEAM-10317] Python - Update BigQueryIO to tag BigQuery Jobs with the
[heejong] fix formatting for pull request post-commit status table
[ajamato] [BEAM-10317] Java - Update BigQueryIO to tag BigQuery Jobs with the
[ajamato] Add requests to python deps
[noreply] [BEAM-9785] Add Python 3.8 postcommit tests (#11788)
[noreply] Merge pull request #12161 from [BEAM-10378] Adding Azure IO FileSystem
[noreply] Use bz2 to compress pickler output for better compression. (#12057)
------------------------------------------
[...truncated 2.42 MB...]
Caused by: java.lang.RuntimeException: Failed to finish remote bundle
at
org.apache.beam.runners.flink.translation.wrappers.streaming.ExecutableStageDoFnOperator$SdkHarnessDoFnRunner.finishBundle(ExecutableStageDoFnOperator.java:769)
at
org.apache.beam.runners.flink.metrics.DoFnRunnerWithMetricsUpdate.finishBundle(DoFnRunnerWithMetricsUpdate.java:89)
at
org.apache.beam.runners.core.SimplePushbackSideInputDoFnRunner.finishBundle(SimplePushbackSideInputDoFnRunner.java:124)
at
org.apache.beam.runners.flink.translation.wrappers.streaming.DoFnOperator.invokeFinishBundle(DoFnOperator.java:836)
at
org.apache.beam.runners.flink.translation.wrappers.streaming.ExecutableStageDoFnOperator.close(ExecutableStageDoFnOperator.java:489)
at
org.apache.flink.streaming.runtime.tasks.StreamTask.closeAllOperators(StreamTask.java:618)
at
org.apache.flink.streaming.runtime.tasks.StreamTask.lambda$afterInvoke$1(StreamTask.java:498)
at
org.apache.flink.streaming.runtime.tasks.StreamTaskActionExecutor$SynchronizedStreamTaskActionExecutor.runThrowing(StreamTaskActionExecutor.java:94)
at
org.apache.flink.streaming.runtime.tasks.StreamTask.afterInvoke(StreamTask.java:496)
at
org.apache.flink.streaming.runtime.tasks.StreamTask.invoke(StreamTask.java:477)
at org.apache.flink.runtime.taskmanager.Task.doRun(Task.java:708)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:533)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.util.concurrent.ExecutionException: java.lang.RuntimeException:
Error received from SDK harness for instruction 4: Traceback (most recent call
last):
File "apache_beam/runners/worker/sdk_worker.py", line 253, in _execute
response = task()
File "apache_beam/runners/worker/sdk_worker.py", line 310, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File "apache_beam/runners/worker/sdk_worker.py", line 480, in do_instruction
getattr(request, request_type), request.instruction_id)
File "apache_beam/runners/worker/sdk_worker.py", line 515, in process_bundle
bundle_processor.process_bundle(instruction_id))
File "apache_beam/runners/worker/bundle_processor.py", line 978, in
process_bundle
element.data)
File "apache_beam/runners/worker/bundle_processor.py", line 218, in
process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 332, in output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "apache_beam/runners/worker/operations.py", line 195, in receive
self.consumer.process(windowed_value)
File "apache_beam/runners/worker/operations.py", line 764, in process
delayed_application = self.dofn_runner.process_with_sized_restriction(o)
File "apache_beam/runners/common.py", line 975, in
process_with_sized_restriction
watermark_estimator=watermark_estimator)
File "apache_beam/runners/common.py", line 712, in invoke_process
windowed_value, additional_args, additional_kwargs)
File "apache_beam/runners/common.py", line 819, in _invoke_process_per_window
self.threadsafe_restriction_tracker.check_done()
File "apache_beam/runners/sdf_utils.py", line 115, in check_done
return self._restriction_tracker.check_done()
File "apache_beam/io/restriction_trackers.py", line 101, in check_done
self._range.stop))
ValueError: OffsetRestrictionTracker is not done since work in range [0, 6) has
not been claimed.
at
java.util.concurrent.CompletableFuture.reportGet(CompletableFuture.java:357)
at
java.util.concurrent.CompletableFuture.get(CompletableFuture.java:1908)
at org.apache.beam.sdk.util.MoreFutures.get(MoreFutures.java:57)
at
org.apache.beam.runners.fnexecution.control.SdkHarnessClient$BundleProcessor$ActiveBundle.close(SdkHarnessClient.java:458)
at
org.apache.beam.runners.fnexecution.control.DefaultJobBundleFactory$SimpleStageBundleFactory$1.close(DefaultJobBundleFactory.java:547)
at
org.apache.beam.runners.flink.translation.wrappers.streaming.ExecutableStageDoFnOperator$SdkHarnessDoFnRunner.finishBundle(ExecutableStageDoFnOperator.java:763)
... 12 more
Caused by: java.lang.RuntimeException: Error received from SDK harness for
instruction 4: Traceback (most recent call last):
File "apache_beam/runners/worker/sdk_worker.py", line 253, in _execute
response = task()
File "apache_beam/runners/worker/sdk_worker.py", line 310, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File "apache_beam/runners/worker/sdk_worker.py", line 480, in do_instruction
getattr(request, request_type), request.instruction_id)
File "apache_beam/runners/worker/sdk_worker.py", line 515, in process_bundle
bundle_processor.process_bundle(instruction_id))
File "apache_beam/runners/worker/bundle_processor.py", line 978, in
process_bundle
element.data)
File "apache_beam/runners/worker/bundle_processor.py", line 218, in
process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 332, in output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "apache_beam/runners/worker/operations.py", line 195, in receive
self.consumer.process(windowed_value)
File "apache_beam/runners/worker/operations.py", line 764, in process
delayed_application = self.dofn_runner.process_with_sized_restriction(o)
File "apache_beam/runners/common.py", line 975, in
process_with_sized_restriction
watermark_estimator=watermark_estimator)
File "apache_beam/runners/common.py", line 712, in invoke_process
windowed_value, additional_args, additional_kwargs)
File "apache_beam/runners/common.py", line 819, in _invoke_process_per_window
self.threadsafe_restriction_tracker.check_done()
File "apache_beam/runners/sdf_utils.py", line 115, in check_done
return self._restriction_tracker.check_done()
File "apache_beam/io/restriction_trackers.py", line 101, in check_done
self._range.stop))
ValueError: OffsetRestrictionTracker is not done since work in range [0, 6) has
not been claimed.
at
org.apache.beam.runners.fnexecution.control.FnApiControlClient$ResponseStreamObserver.onNext(FnApiControlClient.java:177)
at
org.apache.beam.runners.fnexecution.control.FnApiControlClient$ResponseStreamObserver.onNext(FnApiControlClient.java:157)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.stub.ServerCalls$StreamingServerCallHandler$StreamingServerCallListener.onMessage(ServerCalls.java:251)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.ForwardingServerCallListener.onMessage(ForwardingServerCallListener.java:33)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.Contexts$ContextualizedServerCallListener.onMessage(Contexts.java:76)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerCallImpl$ServerStreamListenerImpl.messagesAvailableInternal(ServerCallImpl.java:309)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerCallImpl$ServerStreamListenerImpl.messagesAvailable(ServerCallImpl.java:292)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerImpl$JumpToApplicationThreadServerStreamListener$1MessagesAvailable.runInContext(ServerImpl.java:782)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ContextRunnable.run(ContextRunnable.java:37)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.SerializingExecutor.run(SerializingExecutor.java:123)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
ERROR:root:java.lang.RuntimeException: Error received from SDK harness for
instruction 4: Traceback (most recent call last):
File "apache_beam/runners/worker/sdk_worker.py", line 253, in _execute
response = task()
File "apache_beam/runners/worker/sdk_worker.py", line 310, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File "apache_beam/runners/worker/sdk_worker.py", line 480, in do_instruction
getattr(request, request_type), request.instruction_id)
File "apache_beam/runners/worker/sdk_worker.py", line 515, in process_bundle
bundle_processor.process_bundle(instruction_id))
File "apache_beam/runners/worker/bundle_processor.py", line 978, in
process_bundle
element.data)
File "apache_beam/runners/worker/bundle_processor.py", line 218, in
process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 332, in output
cython.cast(Receiver, self.receivers[output_index]).receive(windowed_value)
File "apache_beam/runners/worker/operations.py", line 195, in receive
self.consumer.process(windowed_value)
File "apache_beam/runners/worker/operations.py", line 764, in process
delayed_application = self.dofn_runner.process_with_sized_restriction(o)
File "apache_beam/runners/common.py", line 975, in
process_with_sized_restriction
watermark_estimator=watermark_estimator)
File "apache_beam/runners/common.py", line 712, in invoke_process
windowed_value, additional_args, additional_kwargs)
File "apache_beam/runners/common.py", line 819, in _invoke_process_per_window
self.threadsafe_restriction_tracker.check_done()
File "apache_beam/runners/sdf_utils.py", line 115, in check_done
return self._restriction_tracker.check_done()
File "apache_beam/io/restriction_trackers.py", line 101, in check_done
self._range.stop))
ValueError: OffsetRestrictionTracker is not done since work in range [0, 6) has
not been claimed.
INFO:apache_beam.runners.portability.portable_runner:Job state changed to FAILED
.sssINFO:apache_beam.runners.worker.worker_pool_main:Listening for workers at
localhost:44795
WARNING:root:Make sure that locally built Python SDK docker image has Python
2.7 interpreter.
INFO:root:Using Python SDK docker image: apache/beam_python2.7_sdk:2.24.0.dev.
If the image is not available at local, we will try to pull from hub.docker.com
INFO:apache_beam.runners.portability.portable_runner:Environment "LOOPBACK" has
started a component necessary for the execution. Be sure to run the pipeline
using
with Pipeline() as p:
p.apply(..)
This ensures that the pipeline finishes before this program exits.
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
STOPPED
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
STARTING
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
RUNNING
[flink-runner-job-invoker] WARN
org.apache.flink.runtime.webmonitor.WebMonitorUtils - Log file environment
variable 'log.file' is not set.
[flink-runner-job-invoker] WARN
org.apache.flink.runtime.webmonitor.WebMonitorUtils - JobManager log files are
unavailable in the web dashboard. Log file location not found in environment
variable 'log.file' or configuration key 'Key: 'web.log.path' , default: null
(fallback keys: [{key=jobmanager.web.log.path, isDeprecated=true}])'.
[[5]{Create, Map(<lambda at fn_runner_test.py:489>), WindowInto(WindowIntoFn),
Map(<lambda at fn_runner_test.py:492>)} (2/2)] WARN
org.apache.flink.metrics.MetricGroup - The operator name [5]{Create,
Map(<lambda at fn_runner_test.py:489>), WindowInto(WindowIntoFn), Map(<lambda
at fn_runner_test.py:492>)} exceeded the 80 characters length limit and was
truncated.
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 0
INFO:apache_beam.runners.worker.sdk_worker:Creating insecure control channel
for localhost:45859.
INFO:apache_beam.runners.worker.sdk_worker:Control channel established.
INFO:apache_beam.runners.worker.sdk_worker:Initializing SDKHarness with
unbounded number of workers.
INFO:apache_beam.runners.worker.sdk_worker:Creating insecure state channel for
localhost:34941.
INFO:apache_beam.runners.worker.sdk_worker:State channel established.
[[5]{Create, Map(<lambda at fn_runner_test.py:489>), WindowInto(WindowIntoFn),
Map(<lambda at fn_runner_test.py:492>)} (1/2)] WARN
org.apache.flink.metrics.MetricGroup - The operator name [5]{Create,
Map(<lambda at fn_runner_test.py:489>), WindowInto(WindowIntoFn), Map(<lambda
at fn_runner_test.py:492>)} exceeded the 80 characters length limit and was
truncated.
INFO:apache_beam.runners.worker.data_plane:Creating client data channel for
localhost:44853
[assert_that/Group/GroupByKey -> [3]assert_that/{Group, Unkey, Match} (1/2)]
WARN org.apache.beam.sdk.fn.data.BeamFnDataGrpcMultiplexer - Hanged up for
unknown endpoint.
INFO:apache_beam.runners.worker.sdk_worker:No more requests from control plane
INFO:apache_beam.runners.worker.sdk_worker:SDK Harness waiting for in-flight
requests to complete
INFO:apache_beam.runners.worker.data_plane:Closing all cached grpc data
channels.
INFO:apache_beam.runners.worker.sdk_worker:Closing all cached gRPC state
handlers.
INFO:apache_beam.runners.worker.sdk_worker:Done consuming work.
INFO:apache_beam.runners.portability.portable_runner:Job state changed to DONE
.INFO:apache_beam.runners.worker.worker_pool_main:Listening for workers at
localhost:45027
WARNING:root:Make sure that locally built Python SDK docker image has Python
2.7 interpreter.
INFO:root:Using Python SDK docker image: apache/beam_python2.7_sdk:2.24.0.dev.
If the image is not available at local, we will try to pull from hub.docker.com
INFO:apache_beam.runners.portability.portable_runner:Environment "LOOPBACK" has
started a component necessary for the execution. Be sure to run the pipeline
using
with Pipeline() as p:
p.apply(..)
This ensures that the pipeline finishes before this program exits.
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
STOPPED
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
STARTING
INFO:apache_beam.runners.portability.portable_runner:Job state changed to
RUNNING
[flink-runner-job-invoker] WARN
org.apache.flink.runtime.webmonitor.WebMonitorUtils - Log file environment
variable 'log.file' is not set.
[flink-runner-job-invoker] WARN
org.apache.flink.runtime.webmonitor.WebMonitorUtils - JobManager log files are
unavailable in the web dashboard. Log file location not found in environment
variable 'log.file' or configuration key 'Key: 'web.log.path' , default: null
(fallback keys: [{key=jobmanager.web.log.path, isDeprecated=true}])'.
INFO:apache_beam.runners.worker.statecache:Creating state cache with size 0
INFO:apache_beam.runners.worker.sdk_worker:Creating insecure control channel
for localhost:41431.
INFO:apache_beam.runners.worker.sdk_worker:Control channel established.
INFO:apache_beam.runners.worker.sdk_worker:Initializing SDKHarness with
unbounded number of workers.
INFO:apache_beam.runners.worker.sdk_worker:Creating insecure state channel for
localhost:44011.
INFO:apache_beam.runners.worker.sdk_worker:State channel established.
INFO:apache_beam.runners.worker.data_plane:Creating client data channel for
localhost:40955
INFO:apache_beam.runners.worker.sdk_worker:No more requests from control plane
INFO:apache_beam.runners.worker.sdk_worker:SDK Harness waiting for in-flight
requests to complete
INFO:apache_beam.runners.worker.data_plane:Closing all cached grpc data
channels.
INFO:apache_beam.runners.worker.sdk_worker:Closing all cached gRPC state
handlers.
[assert_that/Group/GroupByKey -> [3]assert_that/{Group, Unkey, Match} (1/2)]
WARN org.apache.beam.sdk.fn.data.BeamFnDataGrpcMultiplexer - Hanged up for
unknown endpoint.
[grpc-default-executor-0] WARN
org.apache.beam.sdk.fn.data.BeamFnDataGrpcMultiplexer - Hanged up for unknown
endpoint.
Jul 07, 2020 12:38:10 AM
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.SerializingExecutor run
SEVERE: Exception while executing runnable
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerImpl$JumpToApplicationThreadServerStreamListener$1HalfClosed@798e0b90
java.lang.IllegalStateException: call already closed
at
org.apache.beam.vendor.grpc.v1p26p0.com.google.common.base.Preconditions.checkState(Preconditions.java:511)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerCallImpl.closeInternal(ServerCallImpl.java:209)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerCallImpl.close(ServerCallImpl.java:202)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.stub.ServerCalls$ServerCallStreamObserverImpl.onCompleted(ServerCalls.java:371)
at
org.apache.beam.runners.fnexecution.state.GrpcStateService$Inbound.onCompleted(GrpcStateService.java:150)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.stub.ServerCalls$StreamingServerCallHandler$StreamingServerCallListener.onHalfClose(ServerCalls.java:262)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.PartialForwardingServerCallListener.onHalfClose(PartialForwardingServerCallListener.java:35)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.ForwardingServerCallListener.onHalfClose(ForwardingServerCallListener.java:23)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.ForwardingServerCallListener$SimpleForwardingServerCallListener.onHalfClose(ForwardingServerCallListener.java:40)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.Contexts$ContextualizedServerCallListener.onHalfClose(Contexts.java:86)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerCallImpl$ServerStreamListenerImpl.halfClosed(ServerCallImpl.java:331)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ServerImpl$JumpToApplicationThreadServerStreamListener$1HalfClosed.runInContext(ServerImpl.java:817)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.ContextRunnable.run(ContextRunnable.java:37)
at
org.apache.beam.vendor.grpc.v1p26p0.io.grpc.internal.SerializingExecutor.run(SerializingExecutor.java:123)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
INFO:apache_beam.runners.worker.sdk_worker:Done consuming work.
INFO:apache_beam.runners.portability.portable_runner:Job state changed to DONE
.INFO:__main__:removing conf dir: /tmp/flinktest-confxa0vkn
----------------------------------------------------------------------
Ran 82 tests in 503.384s
OK (skipped=15)
Exception in thread Thread-76 (most likely raised during interpreter shutdown):
Traceback (most recent call last):
File "/usr/lib/python2.7/threading.py", line 801, in __bootstrap_inner
File "apache_beam/runners/worker/data_plane.py", line 184, in run
File "apache_beam/runners/worker/sdk_worker.py", line 437, in
shutdown_inactive_bundle_processors
<type 'exceptions.AttributeError'>: 'NoneType' object has no attribute 'time'
Exception in thread Thread-1232 (most likely raised during interpreter
shutdown):
Traceback (most recent call last):
File "/usr/lib/python2.7/threading.py", line 801, in __bootstrap_inner
File "apache_beam/runners/worker/data_plane.py", line 184, in run
File "apache_beam/runners/worker/sdk_worker.py", line 437, in
shutdown_inactive_bundle_processors
<type 'exceptions.AttributeError'>: 'NoneType' object has no attribute 'time'
FAILURE: Build failed with an exception.
* Where:
Script
'<https://ci-beam.apache.org/job/beam_PreCommit_Python2_PVR_Flink_Cron/ws/src/sdks/python/test-suites/portable/common.gradle'>
line: 57
* What went wrong:
Execution failed for task
':sdks:python:test-suites:portable:py2:flinkCompatibilityMatrixBatchLOOPBACK'.
> Process 'command 'sh'' finished with non-zero exit value 1
* Try:
Run with --stacktrace option to get the stack trace. Run with --info or --debug
option to get more log output. Run with --scan to get full insights.
* Get more help at https://help.gradle.org
Deprecated Gradle features were used in this build, making it incompatible with
Gradle 6.0.
Use '--warning-mode all' to show the individual deprecation warnings.
See
https://docs.gradle.org/5.2.1/userguide/command_line_interface.html#sec:command_line_warnings
BUILD FAILED in 31m 9s
78 actionable tasks: 58 executed, 19 from cache, 1 up-to-date
Publishing build scan...
https://gradle.com/s/sffkjwv4rgnpe
Build step 'Invoke Gradle script' changed build result to FAILURE
Build step 'Invoke Gradle script' marked build as failure
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