Hi,
"flat_fluid" is an external program that performs the flat
deformation and is located in your caret distribution's "bin"
directory. "arch.deform.dat" is an output file of flat_fluid that
Caret reads to get the results of the deformation. Are there any
error messages in the terminal window from flat_fluid? flat_fluid is
not a very robust program and will fail if the source and target
surfaces are not reasonably aligned (in a similar coordinate range
with little rotation).
----------------------------------------------------------
John Harwell
[EMAIL PROTECTED]
314-362-3467
Department of Anatomy and Neurobiology
Washington University School of Medicine
660 S. Euclid Ave. Box 8108
St. Louis, MO 63110 USA
On Aug 23, 2006, at 5:16 PM, John Arsenault wrote:
Hi,
When attempting to deform an individual macaque brain to the f99
atlas I
keep recieving an error accessing arch.deform.dat which it says is an
ouput of flat_fluid. I was wondering where in the stream is
flat_fluid
run(so I know where to rerun my analysis) and if there are an likely
sources of errors to this file. Thank you for your help,
John Arsenault
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