On Apr 19, 2007, at 2:04 PM, Michael H. Semcheski wrote:
On 4/19/07, John Harwell <[EMAIL PROTECTED]> wrote:
Mike,
What is an MD2 file?
Is it a version of an MDPlot file which contains contours ?
Hi John,
By MD2 file, I did mean an MDPlot file. Whether or not it contains
contours depends on your definition of contour. I think its more
accurate to say that it contains points, and it seems well
represented by caret_files/MDPlotFile.h.
In my lab, we use the MD2 plotting system, which produces one file
for each section plotted. Each file consists of a list of points.
Each point is represented by (I believe) 7 shorts: x, y, mode,
type, marker_size, pen, and an unused value.
My understanding of Caret is limited. What I thought I needed to
do was read in my MD2 files, and export them as a Caret Contour File.
Mike
The Caret contour file should not be difficult to create. The format
of the Caret contour file is described at http://brainmap.wustl.edu/
caret/caret5.5_help/file_formats/file_formats.html#ContourFile
Caret reads the MDPlot Object file which is a text file and uses the
".mdo" file name extension. Its format is described on page 37 of
http://www.accustage.com/Downloads/MDPlotManualV5.pdf
A tutorial on working with contours in Caret is available from http://
brainmap.wustl.edu/caret/pdf/caret5.5_contours_tutorial.pdf
John
----------------------------------------------------------
John Harwell
[EMAIL PROTECTED]
314-362-3467
Department of Anatomy and Neurobiology
Washington University School of Medicine
660 S. Euclid Ave. Box 8108
St. Louis, MO 63110 USA
On Apr 19, 2007, at 1:32 PM, Michael H. Semcheski wrote:
> Hello,
>
> I'd like to load MD2 files into caret. I'm trying to see what the
> easiest way to do this is.
>
> I can see 'MD2File' in the source code, and I'm willing to write my
> own code if necessary.
>
> Very interested in hearing a reply,
>
> Mike
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