Hi Donna and David,
Thanks very much for your kind replies and for letting me know what my options are in Caret. Many thanks again. Best wishes, Hamied ________________________________ From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of David Van Essen Sent: 21 November 2007 04:00 To: Caret, SureFit, and SuMS software users Subject: Re: [caret-users] Rhesus Macaque Cortical Partitioning Hamied, Donna is correct that Romanski et al is not one in our F99 atlas dataset. There are various other schemes that include auditory cortex and are available on our macaque F99 atlas (see Macaque.F99.RIGHT.DEMO.73730.spec in http://sumsdb.wustl.edu/sums/directory.do?id=6585200&dir_name=CARET_TUTO RIAL_SEPT-06) It is possible to add this partitioning scheme to our atlas collection, using an approach similar to that done for other schemes originally published as drawings of a qualitatively generated flat map. However, this is not something that I envision attending to in the near future, give competing priorities. David VE On Nov 19, 2007, at 11:18 AM, Donna Dierker wrote: Hi Hamied, David will know for sure, but I don't see it in any of the paint file column-names in the September 2006 tutorial. The closest sounding one was Preuss & Goldman-Rakic 91 Fig 4, the comment for which says: Preuss, T.M., and P.S. Goldman-Rakic (1991a) Myelo- and cytoarchitecture of the granular frontal cortex and surrounding regions in the strepsirhine primate galago and the anthropoid primate macaca. J. Comp Neurol. 310:429-474 http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dop t=AbstractPlus&list_uids=1939732 Mapped from their Fig 4 to the atlas left hemisphere using slice-based registration (Caret Tutorial 10). Deformed with: Resampled_Macaque.F99UA1. None of the files seems to contain "Romanski" (i.e., find ./CARET_TUTORIAL_SEPT06 -type f |xargs grep -ia Romanski returns no results). Donna On 11/19/2007 11:02 AM, Hamied Haroon wrote: Dear All, I want to apply a cortical partitioning scheme to MRI brain data, acquired in a rhesus macaque, which matches the cortical areas described in this reference L.M. Romanski, B. Tian, J. Fritz, M. Mishkin, P.S. Goldman-Rakic & J.P. Rauschecker, "Dual streams of auditory afferents target multiple domains in the primate prefrontal cortex", /Nat Neurosci/, *2*: 1131-6, 1999 I would be very grateful if anyone could please let me know if this cortical partitioning scheme might be available in Caret or anywhere else on the web, or could offer me some constructive advice. Many thanks in anticipation. Best wishes, Hamied ________________________________________________ Hamied Ahmad Haroon PhD AMInstP Research Associate in MR Neuroimaging Imaging Science and Biomedical Engineering Research Group School of Medicine Faculty of Medical and Human Sciences The University of Manchester Room G.603 Stopford Building, Oxford Road, Manchester M13 9PT England, United Kingdom Tel: +44 (0)161 275 6871 Fax: +44 (0)161 275 5145 Email: [EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]> Web: www.isbe.man.ac.uk/~hharoon <http://www.isbe.man.ac.uk/%7Ehharoon> ________________________________________________ ------------------------------------------------------------------------ _______________________________________________ caret-users mailing list caret-users@brainvis.wustl.edu http://pulvinar.wustl.edu/mailman/listinfo/caret-users _______________________________________________ caret-users mailing list caret-users@brainvis.wustl.edu http://pulvinar.wustl.edu/mailman/listinfo/caret-users
