Sofia,

When you installed caret v5.6, did you install the full distribution  
or just the executable?  The borders listed on the flattening dialog  
are contained in files located in the caret distribution's "data_files/ 
flatten_borders".  If you did not get the full distribution, try  
downloading and using it.

Another possibility is that you have the CARET5_HOME environment  
variable set.  This is only needed in very unusual circumstances so,  
if it is set, unset it.

-----------------------------------
John Harwell
j...@brainvis.wustl.edu

Department of Anatomy and Neurobiology
Washington University School of Medicine
660 S. Euclid Ave   Box 8108
Saint Louis, MO 63110




On Jan 15, 2009, at 7:40 AM, Sofia Crespi wrote:

> Hi Donna
> I have a problem with the segmentation and flattening processes with  
> the new version (caret v5.6) I have downloaded.
> with the old version (5.5) I segmentated my volume, once the  
> segmentation process finished I corrected manually the topological  
> errors still present and finally I generated a final surface for  
> flattening.
> Then I used to select the Ellipsoid Surface, from the Surface Menu  
> and on the Flatten Full or Partial Hemisphere  Dialog I set the  
> Flattening type to Full Hemisphere (Ellipsoid) and Morph Sphere  
> finally I selected the Human Right (or left!) Standard Cuts as  
> Border Template Cuts.With my new caret version this last step is no  
> more possible.
> I can only choose between :
> 1. choose template Borders.....But I do not know which Template  
> Borders I should select and where to find the template
> 2. Use currently loaded Ellipsoidal Borders, but if I choose this  
> second option caret tells me that Border Files contains no Borders.
> ???
>
> Can you help me?
> thank you in advance
> sofia
>
> _______________________________________________
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> caret-users@brainvis.wustl.edu
> http://brainvis.wustl.edu/mailman/listinfo/caret-users

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