Hello, I'm new to Caret and I'd like to run spherical registration to the atlas and do group analysis. Most of my analysis is done in custom Matlab codes. I use a combination of FreeSurfer and SurfRelax (a less used software) to do segmentation and surface recon. I'm able to output my surface to Caret fomat, i.e., I can generate topo and coords files for a folded hemisphere, and open/visualize them in Caret. I tried to follow the Caret_5.5_Tutorial_Segment.pdf for doing registration, but I'm currently stuck, because it seems to require flattened/inflated/spherical surfaces of my subjects. I'm imagining that I can start with my folded surface and do all those things, and then follow the tutorial to do spherical registration? My question for now is simply: is this the right approach? If so, can someone tell me how to start with a folded surface to generate the Inflated, Ellipsoid surfaces, etc., that are normally generated during the segmentation process in Caret? (e.g., the surfaces shown in Fig. 34 in the tutorial) I looked in the menus but couldn't find anything. Thank you very much,
--Taosheng Liu _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
