Hi Donna, Thanks very much for your advice.
Regards Kwliu ________________________________________ From: [email protected] [[email protected]] on behalf of Donna Dierker [[email protected]] Sent: 02 August 2010 15:34 To: Caret, SureFit, and SuMS software users Subject: Re: [caret-users] Importing Freesurfer files into Caret and using Brodmann's paint files Hi Kwliu, First, have a look at this paper, if you haven't already read it: Fischl B, Rajendran N, Busa E, Augustinack J, Hinds O, Yeo BT, Mohlberg H, Amunts K, Zilles K. "Cortical folding patterns and predicting cytoarchitecture." Cereb Cortex. 2008 Aug;18(8):1973-80. Epub 2007 Dec 12. Depending on your needs, Freesurfer may have what you want. Second, the easiest way to get your surfaces registered to PALS-B12, so you can access atlas goodies like Brodmann paint areas is to use our scripts to import and register them: Download Freesurfer_to_PALS-B12 Pipeline Distribution http://brainvis.wustl.edu/wiki/index.php/Caret:Download#Download_Freesurfer_to_PALS-B12_Pipeline_Distribution See the README.txt file in the PALS_B12.LR.zip archive. Donna On 08/02/2010 08:43 AM, Kuk Wai Liu wrote: > Hi, > > I've got all the output data from Freesurfer after running the > recon-all function to parcellate and segment the data, and would like > to import these files into Caret so that i can use the Brodmann paint > files on them. > > Could you point me in the direction of which tutorials i should look > at, or any advice as to how this may be done, please? > > Regards > > Kwliu > ------------------------------------------------------------------------ > > _______________________________________________ > caret-users mailing list > [email protected] > http://brainvis.wustl.edu/mailman/listinfo/caret-users > _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
