Dear Caret users, I am trying to visualize the result of a parcellation scheme. I would like to ask how a paint file can be generated. I would like to create something like the paint file for the different sulci as it is shown in the start up guide. The way I do the visualization now is making a niftii file where each voxel has a unique integer that codes for the module that it has been assigned to. When I import it to the Caret (map volume to surfaces option) by choosing the appropriate color mode, the different regions appear with different colors. And this bring us to the next question: In the map volumes to surfaces menu, there are the options to choose the appropriate Caret surface. Despite the fact that I have inflated , flat and very inflated surfaces (as .coord files) only the fiducial is offered as an option. This can cause a problem since when I import the volume some regions might be colored just because their tip is near by a gyrus within my ROI for instance (neighbouring gyri will have few scattered voxels colored if eg the interpolation method is used ). Is there a way to explicitly map the volume to a specific surface (eg. the very inflate one)? Some help with these issues would be great.
Many thanks in advance and kind regards, Alex
_______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
