Passing on Colin's thoughts on matlab.

Begin forwarded message:

> From: Colin Reveley <[email protected]>
> Subject: Forward to list
> Date: December 7, 2012 12:34:38 PM CST
> 
> I can't figure out how to use my iPad to send to the list. Could you pleas 
> forward:
> 
> Tim: thanks. That sounds like a confusing problem averted before it happenned.
> 
> Frederick:
> 
> I do not use pals. However any caret surface can be converted to a surf.gii 
> (no topo). I think caret5 does it. Nearly certain. Although it can't read 
> that . The workbench beta can do it for sure.
> 
> Then all metric data can be converted to gifti surfaces (eg func.gii). And so 
> on. 
> 
> There is a matlab gifti package. It is good. I have used it. I recommend it. 
> It is what you want.
> 
> Other people will know more about what can and cannot be made gifti. If its a 
> paint or metric or surface etc you can do it easily. Although in matlab 
> obviously mapping the colours is up to you. That might make paints hard.
> 
> There is cifti. No idea. Someone else may care to comment.
> 
> I like to use this method for certain displays and analyses, it's good. Pals 
> is probably partly doable. Look at using matlab, caret and workbench all 
> together. Actually you just said you were new so this is a bit much.
> 
> Your surfaces and metrics can be saved in this way using caret5 GUI I believe 
> . It's not the most introductory thing to want to do however. But surfaces 
> metrics and paints shouldnt be too bad to get into matlab. obviously you need 
> the gifti package from matlab exchange. you might consider that caret is 
> really very good and may very well do what you want. Good luck
> 
> Colin

The reason I sometimes send from [email protected] instead of 
[email protected] is that my work SMTP server won't let me send outside 
the subnet using the Mac mail client.  It works fine via Squirrelmail, and 
maybe it would work if I VPN'd in.  I am subscribed under both addresses, 
though.

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