I can think of only two possibilities: * You need to add the directory where the caret_command binary executable is located to your path. This is the same directory where your caret5 executable is located. Which shell do you use (e.g., bash or tcsh)? The way you add the caret binary directory to your path depends on your shell. This page might help:
http://askubuntu.com/questions/60218/how-to-add-a-directory-to-my-path Alternatively, you can globally replace the caret_command calls with the full pathname of that executable in the script. But adding it to your path means you can enter "caret5" at the command line without typing the absolute pathname. * A less likely explanation is that the command was somehow missing from your distribution (or got deleted). It's part of the distributions, just like caret5 is. We can walk you through the path setting if you tell us your shell (e.g., do "echo $SHELL" at the command line to find out). > Hellow caret experts, > when I run freesurfer_to_fs_LR.sh, there are many "caret_command: command > not found". > my operation system: Linux rhel6.2 > I could open caret5 in terminal, but when I run caret_command, the result > was "command not found". > what is the problem? > Thanks! > > > -- > James Wang > > > > _______________________________________________ > caret-users mailing list > [email protected] > http://brainvis.wustl.edu/mailman/listinfo/caret-users > _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
