Thank you really much. The first option worked out just fine and indeed the offset is +2
Thanks again Alex ________________________________________ From: [email protected] [[email protected]] On Behalf Of Donna Dierker [[email protected]] Sent: Thursday, August 21, 2014 3:05 PM To: Caret, SureFit, and SuMS software users Subject: Re: [caret-users] Niftii integers and PHT00 atlas acronyms Try saving the paint volume as wunil ifh format. Then read the resulting .ifh file (a text file). The integer : label mappings are there, but there is a translation of two, if I recall correctly. You could also convert the surface paint file to text and look just after the header; that mapping should require no offset, but I'm not 100% certain your surface and volume indices will match. The volume ifh is safer, and the offset is constant across labels. I think it is +2 -- not certain. On Aug 21, 2014, at 6:47 AM, Goulas Alexandros (PSYCHOLOGY) <[email protected]> wrote: > Dear all, > > > I have exported the PHT00 atlas from Caret to niftii with the paint to > volume function. The niftii volume consists of unique integers in every voxel > denoting an area in PHT00. Can you please indicate how I can get the > correspondances between these integers and the acronyms of the PHT00 areas? > > many thanks in advance. > > > Alex > _______________________________________________ > caret-users mailing list > [email protected] > http://brainvis.wustl.edu/mailman/listinfo/caret-users _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
