**
*Dear all,*
*
We are excited to announce the release of the new version of the PISA
software, developed at PDBe, based on the jsPISA implementation from
CCP4. This new version, PISA-lite, developed in collaboration with the
CCP4 core team, enables the calculation of macromolecular interaction
data for every assembly in the PDB.
PISA-lite generates new and enhanced PISA interaction data based on all
the annotated assemblies in the PDB archive and is available in JSON
format from the PDBe API. It is designed to reduce the computational
overhead of the software by working only on known assemblies in PDB
entries and calculating interactions.
By focusing on known assemblies, PISA-lite enables the weekly
calculation of macromolecular interactions for each assembly in the PDB,
providing up-to-date information on protein structures and their
interactions. These pre-calculated annotations can then be provided for
every PDB entry to support researchers in structural biology,
bioinformatics, and related fields.
To find out more about the PISA-lite implementation and how to access
the data,
visit:https://www.ebi.ac.uk/pdbe/news/improved-macromolecular-interactions-data-pisa-lite
<https://www.ebi.ac.uk/pdbe/news/improved-macromolecular-interactions-data-pisa-lite>
Kind Regards,
*Deborah Harrus
PDBe
--
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Deborah Harrus, Ph.D.
PDBe Archive Project Leader, Biocuration Lead
PDBe - Protein Data Bank in Europe
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD UK
http://www.PDBe.org
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