This is very common.
You need to set the occupancy of something on the 3 fold axis to 0.33333 of course.

If you have an anom measurement then do a DANO map with PHIC and FOM (you need to run CAD to combine the mtz file with DANO with the output of REFMAC) - the peaks should correspond to any metals or S or whatever..

Eleanor

and this should Tobias Karlberg wrote:

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Hello ccp4bb,

I have data with electron density at a crystallographic threefold axis. The density is not perfectly spherical and I suspect a metal to bind at this site. What is the best strategy to handle density at crystallographic symmetry axes? Does anyone have similar experience of this kind?

Regards Tobias


Tobias Karlberg
--------------------------------------------
Molecular Biophysics, Center for Chemistry & Chemical Engineering,
Lund University, Box 124, 221 00, Lund - Sweden E-mail: [EMAIL PROTECTED]
Web: http://www.mbfys.lu.se




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