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-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Schulman, Brenda wrote: > Is there an easy program that converts percent homology in a group of > proteins and maps it on a structure? Doing it manually is a bit of a pain. ConSurf [1] does a great job with this, and has a web-based viewer as well as returning a PDB with conservation values in the B column. You can just feed it a PDB and a list of sequences, and it'll do the rest. Alternately, it will accept alignments or phylogenetic trees. You might try the "new version" link, the Bayesian analysis works a bit better. HTH, Donnie 1. http://consurf.tau.ac.il/ -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.2.2 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org iD8DBQFENXjFXVaO67S1rtsRAmHQAJ9RUxCANo/ipAGshj9RziocQgWtmwCeICS8 AGuQhr/50esNykIuuDnCPCo= =UTNV -----END PGP SIGNATURE-----
