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My bad.
Sorry.
The problem is actually in
source /sw/share/xtal/ccp4-6.0/include/ccp4.setup
so that file needs to be fixed. But I am about to leave for Yosemite, so
I can't fix it until Monday.
Bill
On Thu, 4 May 2006, Christian Benda wrote:
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Dear All:
I have fink-installed and compiled cpp4-6.0 on an intel mac under my user
account (administrator). Now I am stuck with a banality (hopefully) which I
seem to be unable to resolve:
In order to get everything setup correctly (paths etc.) the file
/sw/bin/init.csh has to be sourced from the .cshrc file. After adding 'source
/sw/bin/init.csh' to my .cshrc file I get the following error message in every
new shell:
limit: stacksize: Can't set limit (Operation not permitted)
As one consequence, the PATH variable is not modified correctly.
The 'set limit' command is issued from whithin the ccp4.setup script (limit
stacksize 65536) which - in turn - is called from init.csh. What seems to be a
permission conflict works alright when I source init.csh in a shell as root. I
tried to source init.csh from the system-wide csh.cshrc in /etc but that
doesn't help either (no error message, but no paths etc. either).
The current limit for stacksize is 8164 kbytes
Has any one else had this problem and? Any hint is highly appreciated!
Many thanks in advance,
Christian
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Max-Planck-Institute for Biochemistry
Structural Cell Biology
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