Re: [ccp4bb]: how to get poly_ser model

[Ashley Buckle]

Gerard Kleywegts program SEAMAN will do this (command SERIne): http://alpha2.bmc.uu.se/usf/ consider also using "mixed" models (eg retain sidechains  of conserved residues): CCP4 program chainsaw will do this, as will the SCWRL server after a FFAS alignment: http://ffas.ljcrf.edu/ffas-cgi/cgi/ffas.pl Put the resulting ensemble into PHASER for MR I havent tried Mr Bump yet Ashley On 08/06/2006, at 1:57 PM, huangwei wrote: ***  For details on how to be removed from this list visit the  *** ***          CCP4 home page http://www.ccp4.ac.uk         *** Hi guys,    I would like to try multi_probe, so I need an all atom, poly_Ser and poly_ala model.It is easier to get all atom and poly_ala model, how could I get poly_ser model?    By the way,can CCP4 run the multi_probe?    Best regards,   　　　　　　　　huangwei [EMAIL PROTECTED] 　　　　　　　　　　2006-06-08 Ashley Buckle Ph.D Senior Research Fellow The Department of Biochemistry and Molecular Biology  School of Biomedical Sciences, Faculty of Medicine & Victorian Bioinformatics Consortium (VBC) Monash University, Clayton, Vic 3800 Australia http://vbc.med.monash.edu.au/~abuckle iChat/AIM: blindcaptaincat Tel: (613) 9905 3781 (office) Tel: (613) 9905 1653 (lab) Mobile: 0400 206069 Fax : (613) 9905 4699