This is discussed in the refmac documentation under
http://www.ccp4.ac.uk/dist/html/refmac5/files/coordinates.html
Look for SSBOND.
The short answer is you cant do it, and need to specify a LINK
Eleanor
Juergen Bosch wrote:
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Hi all,
it's probably a trivial question, but I was unable to resolve this
problem, therefore I ask the experts:
Here's what I think it should look like (this is before refinement but
modeling a second conformation for both cysteines with 0.5 occupancy
as a start)
http://faculty.washington.edu/jbosch/examples/Before_refinement.png
The PDB File contains the usual SSBOND command, but unfortunately is
interpreted for both conformations as disulfide bonds - which is not
exactly what I wanted.
http://faculty.washington.edu/jbosch/examples/After_refinement.png
What is the correct syntax to tackle this trivial problem ?
Thank you for your suggestions,
Jürgen
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