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Hi Ed,

I suggest the reading of the following truly valuable paper:

Tan S, Hunziker Y, Pellegrini L, Richmond TJ.
Crystallization of the yeast MATalpha2/MCM1/DNA ternary complex: general methods and principles for protein/DNA cocrystallization.
J Mol Biol. 2000 Apr 7;297(4):947-59.


Roberto

On 15 Sep 2006, at 13:29, Ed Wright wrote:

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I am starting work on a protein that binds double-stranded DNA. In other dsDNA-protein stuctures I have noticed that some structures use blunt-ended DNA while others use sticky end DNA with 1,2 or 3 base G/C overhangs. Is there an advantage to using sticky-end vs. blunt-end DNA for crystallization? Also,
what is the reason for using the G/C overhang?


---
Dr. Roberto Steiner
Randall Division of Cell and Molecular Biophysics
New Hunt's House
King's College London
Guy's Campus
London, SE1 1UL
Phone +44 (0)20-7848-8216
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