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For Bourne-like shells (bash, sh, zsh, ksh, ...)
setenv FOO BAR should be changed to
export FOO=BAR
PATH=${PATH}:/programs/arp_warp/arp_warp_6.1.1/bin/`uname`
export PATH
should work, if not try
PATH=${PATH}:/programs/arp_warp/arp_warp_6.1.1/bin/$(uname)
export PATH
and for completeness,
alias FOO BAR
should become
alias FOO=BAR
Here's some useful links for basic unix stuff:
http://xanana.ucsc.edu/xtal/unix.html
HTH,
Bill
PS: You can easily change your shell to tcsh if you don't feel
comfortable in bash. Alternately, you can switch to zsh ...
Nicholas Noinaj wrote:
> *** For details on how to be removed from this list visit the ***
> *** CCP4 home page http://www.ccp4.ac.uk ***
>
>
> Hi all,
>
> ONe quick question. Is it possible to setup Arp/wArp to work using bash
> instead of csh (OS --> RHEL4)? The instructions explicitly describe using
> csh, and nothing for bash.
>
> set path = ( /programs/arp_warp/arp_warp_6.1.1/bin/`uname` $path )
> setenv warpbin /programs/arp_warp/arp_warp_6.1.1/bin/`uname`
>
> THis could potentially be more of a Linux 'newbie' issue, so any
> assistance on how to work around (or 'translate' to bash) would be greatly
> appreciated.
>
> Thanks in advance for any feedback!
>
>
>
> Cheers,
> Nick
>
>
>
>
>
>
>
> ________________________________________
>
> Nicholas Noinaj
> University of Kentucky College of Medicine
> Department of Molecular and Cellular Biochemistry
> The Center for Structural Biology
> Biomedical Biological Sciences Research Building, Rm 236
> 741 S. Limestone
> Lexington, Ky 40536
> Lab: 859-323-8183
> Cell: 859-893-4789
> Home: 859-228-0978
> [EMAIL PROTECTED]
> noinaj.com
>
>
>
>
>
>
