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I guess you haven't source'd ccp4.setup or equivalent. How this is done depends on your local setup. Normally it will be done as part of .cshrc or .bashrc ccp4fyp looks in $CINCL which is defined as $CCP4/include Regards Martyn On Wed, 2006-12-06 at 17:40 -0500, Sarat C Sahu wrote: > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > Hi All, > I am new to this CCP4 mailing list. I am trying to superimpose different > PDB structures to see how they are different. I am trying to use the "LSQKAB" > script - a part of CCP4 program. While I tried the example script > "lsqkab.exam" from the directory ~/CCP4/ccp4-6.0.1/examples/unix/runnable I > get following error: > > >>>>>> CCP4 library signal ccp4_general:Cannot open environ.def (Success) > raised in ccp4fyp <<<<<< > > ############################################################### > ############################################################### > ############################################################### > ### CCP4 6.0: PDBCUR version 6.0 : ## > ############################################################### > User: scsahu Run date: 6/12/2006 Run time: 17:27:54 > > > Please reference: Collaborative Computational Project, Number 4. 1994. > "The CCP4 Suite: Programs for Protein Crystallography". Acta Cryst. D50, > 760-763. > as well as any specific reference in the program write-up. > > ***** ERROR #40 READ: > > Logical file name not found. > Can anyone suggest me how to overcome from this program? Any help or > suggestion will be greatly appreciated. > Thanks > -Sarat Sahu > > >
