Hsp70 is very hydrophobic, and the problem mentioned by you is quite common in many affinity based purifications. I suggest that you load your sample on an HIC (say, phenyl sepharose) and elute with a gradient from high-salt to no-salt. Hsp70 typically elutes close to no-salt buffers on the HIC chromatography.

Shekhar Mande

On Fri, 9 Mar 2007, Yong Tang wrote:

RE: Removal of bacterial chaperone Hsp70 contaminant from recombinant
protein preparation

Dear all,

I have a protein expressed at 37C for 3 hours in BL21 DE3 and purified
with sub-stoichiometric amount of apparent Hsp70 contaminant even
after exhaustive affinity (GST-fusion or His-tagged), ion-exchange and
sizing column steps. I would like to know if you have a
well-established protocol for getting rid of such a contaminant. I
asked around and was told to try adding ATP at certain(?) stage of the
purification.

I would much appreciate your input.

Many thanks! –yong @ the Wistar Institute

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