Hi all
I am trying to run autoSHARP. When I submit the job I got following message and
the job is not running. Does any one have got error like this when you start
autoSHARP
Any advice please
Sajid
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(In case of remotely submitted jobs, the "go to log file" will not work until
the job is actually started)
USAGE: /home/sajid/sharp/sushi/submit/interactive/start.sh -h $BDG_home -u
$BDG_user -p $BDG_project -j $BDG_job
-t $BDG_type -l $BDG_log -e $BDG_err -v "$BDG_var" -b -a
-h $BDG_home = Home directory of BDG installation
-u $BDG_user = user name
-p $BDG_project = project name
-j $BDG_job = job ID (name + number)
-t $BDG_type = (buster|sharp|denmod)
-l $BDG_log = log file
-e $BDG_err = standard error file
-v "$BDG_var" = variable setting
-b = flag for backgrounding job
-a = flag to do everything apart from actually running the job
Maybe you are using the old syntax (Sushi < 3.0.16) in your
$BDG_home/submit.local/*/
subdirectories? Have a look at the new syntax in
$BDG_home/submit/*/
Your actual command was:
/home/sajid/sharp/sushi/submit/interactive/start.sh -h /home/sajid/sharp -u
syed -j MIRAS_with se.0 -p None -t detect -l LISTautoSHARP -e STDERR -b
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