Jacob,

Coomassie fluorescence is linear over a wide range of concentrations (citation below). You need access to an infrared scanner in order to use this technique. I've used a Li-cor Odyssey scanner with good results (http://www.licor.com/bio/odyssey/index.jsp).

Anal Biochem. 2006 Mar 15;350(2):233-8.
Quantitation of protein on gels and blots by infrared fluorescence of Coomassie blue and Fast Green.
Luo S, Wehr NB, Levine RL.

Coomassie blue staining of gels and blots is commonly employed for detection and quantitation of proteins by densitometry. We found that Coomassie blue or Fast Green FCF bound to protein fluoresces in the near infrared. We took advantage of this property to develop a rapid and sensitive method for detection and quantitation of proteins in gels and on blots. The fluorescence response is quantitative for protein content between 10 ng and 20 microg per band or spot. Staining and destaining require only 30 min, and the method is compatible with subsequent immunodetection.

PMID: 16336940
Regards,
Steve

--
Steven Darnell
University of Wisconsin-Madison
Madison, WI USA

Jacob Keller said the following, on 09/25/2008 04:35 PM:
Dear Crystallographers,

I remember having seen on this listserve that coomassie stain is horribly non-linear in intensity per protein concentration, which leads me to two questions:

1. Does anybody have a reference for quantitation of coomassie's linearity (and possibly other stains), i.e. where and how extensive the linear range is, and
2. Can anybody suggest a more linear protein gel stain?

Thanks,

Jacob Keller

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