Dilute both the Protein and DNA before mixing them at the molar ratio you require - I would aim to have the protein component at around 1 mg/ml.
Mix, then concentrate together, till you reach the concentration you want.

Antony.

On Wed, Oct 1, 2008 at 6:52 PM, E rajakumar <[EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]>> wrote:

    Dear All
    Sorry for non-crystallography query. I am working on
    DNA binding protein, while mixing DNA with protein for
    preparing Protein-DNA complex for crystallization,
    protein is precipitating.  pI of the protein is 9.3
    and in 15 mM HEPES 7.0, 150mM NaCl and 5% glycerol.
    Concentration of the protein used for mixing with DNA
    is 8 mg/mL. DNA to protein molar ratio is 1.2.  Please
    advise me how to prevent precipitation. Is changing of
    buffer pH and adding divalent cation like MgCl2 can
    help in preventing precipitation?
    Thanking You
    Rajakumara


    E. Rajakumara
    Postdoctoral Fellow
     Strcutural Biology Program
     Memorial Sloan-Kettering Cancer Center
     New York-10021




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