[ccp4bb] Depositing coordinates with riding hydrogens

[Jonathan Winger]

Hi all-

Just wondering what the consensus is - should a structure refined with  
riding hydrogens be deposited with the coordinates for the hydrogens  
included?  One could argue that, since they were used in the  
refinement to obtain the model and statistics reported, they should be  
included in the deposited pdb file.  On the other hand, the presence  
of hydrogens in the pdb file might lead some to think the hydrogens  
were refined against density when they really weren't.  Thoughts?

Thanks,
Jon