Filip Van Petegem wrote:
While trying to perform some docking experiments with crystal structures
into cryoEM maps, I found that some deposited EM maps are not at the
right size relative to crystal structure coordinates. The problem is
independent of the graphics program used (e.g. VMD, chimera, pymol all
show the EM map as too small).
Is there any straightforward way to get the map to the right scale,
using information somehow hidden in the map header?
You can do this this in Coot using
(scale-cell imol sc_u sc_v sc_w)
You can then export the (CCP4-format) map.
Paul.
