I think the second LLG value is after refinement. But sometimes I see that the second LLG goes negative and I wonder what it means. For example:
RFZ=3.1 TFZ=17.2 PAK=0 LLG=238 LLG=-603

-Konstantin

On Wed, 30 Sep 2009, Simon Kolstoe wrote:

Dear all,

In the phaser .sol file what do the two LLG's correspond to on the SOLU SET line eg

SOLU SET  RFZ=20.7 TFZ=35.4 PAK=0 LLG=1699 LLG=2821

Do they show an initial and a refined LLG or do they correspond to the rotation and translation function as in the Z scores?

I checked the appropriate web page and didn't see anything immediate.

http://www-structmed.cimr.cam.ac.uk/phaser/documentation/phaser-2.1_key.html#MR_solved_it

Thanks,

Simon

--------------------------
Konstantin Korotkov, Ph.D.

Research Scientist
University of Washington
Department of Biochemistry
Box 357742
Seattle, WA 98195-7742

(206)616-4512
[email protected]
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