Hi, I'm trying to get CCP4 (6.1.2) suite up and running on our shiny new Xserve cluster. We're using a NFS shared drive for the software, which is then loaded in to the user's $PATH using Modules (http://modules.sourceforge.net/). I had a bit of trouble getting the source code to build in our environment, so I grabbed the contents of the Mac OS X package & changed some of the variables as needed. I found a modulefile on the bulletin board (http://www.mail-archive.com/ccp4bb@jiscmail.ac.uk/msg10981.html), which I changed a little to suit our setup.
After a few tweaks to the module file, I managed to get ccp4i going on the cluster. Unfortunately I don't seem to be able to get the example job (System Administration -> Configure Interface -> Test -> Running Task) to run. I'm currently only running on "localhost" (I'll move it to PBS/Torque once I get it running). It's complaining it can't open environ.def. It's not a permissions thing (I changed to 777, still got the error). I read somewhere that ccp4fyp looks at the $CINCL variable. This is set in the modulefile as: CINCL=/software/modules/ccp4/6.1.2/ccp4-6.1.2/include I've tried symlinking the environ.def (found in /software/modules/ccp4/6.1.2/ccp4-6.1.2/shared) into the directory, but it didn't seem to fix things. I was wondering if anyone might have any ideas? The job's log looks like this: #CCP4I VERSION CCP4Interface 2.0.5 #CCP4I SCRIPT LOG import #CCP4I DATE 09 Dec 2009 16:16:44 #CCP4I USER markbate #CCP4I PROJECT PROJECT #CCP4I JOB_ID 4 #CCP4I SCRATCH /tmp/markbate #CCP4I HOSTNAME orchard.med.monash.edu.au #CCP4I PID 1586 >>>>>> CCP4 library signal ccp4_general:Cannot open environ.def (Error) raised in ccp4fyp <<<<<< na4tomtz: Cannot open environ.def Times: User: 0.0s System: 0.0s Elapsed: 0:00 *************************************************************************** * Information from CCP4Interface script *************************************************************************** The program run with command: /software/modules/ccp4/6.1.2/ccp4-6.1.2/bin/na4tomtz HKLIN "/software/modules/ccp4/6.1.2/ccp4-6.1.2/share/ccp4i/test_data/rnase_tutorial.na4" HKLOUT "/tmp/markbate/PROJECT_4_1_mtz.tmp" has failed with error message na4tomtz: Cannot open environ.def *************************************************************************** #CCP4I TERMINATION STATUS 0 " na4tomtz: Cannot open environ.def" #CCP4I TERMINATION TIME 09 Dec 2009 16:16:44 #CCP4I MESSAGE Task failed thanks, mark