Dear CCP4 developers and all,
CCP4i of CCP4 version 6.1.3 can set the default PDB viewer to PyMOL
(Default Viewers section in Preferences dialog). I have not noticed this
function in previous versions.
But viewing PDB file with PyMOL fails. It shows message dialog "ERROR
could not start PyMol".
So, I modified the souce of fileviewer. It is here.
$ diff -u fileviewer.tcl.orig fileviewer.tcl
--- fileviewer.tcl.orig 2009-09-17 19:18:25.000000000 +0900
+++ fileviewer.tcl 2010-03-08 21:27:16.000000000 +0900
@@ -654,7 +654,7 @@
}
#---------------------------------------------------------------------
-proc RunPyMol { $args } {
+proc RunPyMol { filename } {
#---------------------------------------------------------------------
#d_sum Run PyMol lto display coordinates
#d_arg filename Input PDB coordinate file
---------------
This modification will fix the problem.
Please check this patch.
# Apologies in solution if this is already-answered question.
Thanks.
Nobuo OKAZAKI
