If you already have your map, or if you can calculate the map in CCP4, you can print out density at atoms using the Uppsala program MAPMAN, function PEEK: http://xray.bmc.uu.se/usf/mapman_man.html#S30 hth
Hailiang Zhang wrote:
Hi, Phenix.model_vs_data offers a great function which prints out the sigma level of the electron density at each residue or atom center. This is very useful comparing the relative density between two maps at the given region, however, it is running a little bit slow. I am just wondering whether some CCP4 subroutines also provides the similar function (didn't find in overlapmap). Thanks a lot! Best Regards, Hailiang
