Dear Engin: I've put placeholder packages for those entitled "imosflm-aqua" and "mosflm" in fink CVS that simply point back to what is in ccp4. The "imosflm" package remains a placeholder with dependencies on all the X11-based tcl/tk extensions required to get imosflm in ccp4 to work with an X11 display (which you might need if you don't have OS X 10.6, or if you want to remote-display the GUI).
All the best, Bill On Jul 6, 2010, at 2:13 PM, Engin Özkan wrote: > Thanks for clearing that. Setting the mosflm executable to the ccp4 version, > in combination with either the fink or the system wish, gives a nicely > working imosflm. And thanks for the fink packages... > > Engin > > On 7/6/10 6:36 AM, William G. Scott wrote: >> Remove both. >> >> On OS X, 10.6, imosflm uses the tcl/tk supplied with OS X, and the latest >> mosflm is in ccp4, so there is no need for any of that. Just use what is in >> ccp4. >> >> Sorry for this. >> >> >> On Jul 5, 2010, at 4:34 PM, Engin Özkan wrote: >> >>> Hi everybody, >>> >>> I was doing a regular fink update (OS X 10.6.4, 32-bit fink) when I >>> encountered a silly outcome, which I thought others might have observed. >>> During the imosflm update, I get an error saying that imosflm depends on >>> mosflm, and it also conflicts with mosflm at the same time. >>> >>> This was my list of mosflm-related packages: >>> % fink list mosflm >>> Information about 9265 packages read in 0 seconds. >>> (i) imosflm 1:1.0.4-3 Installs mosflm >>> GUI for use with X11 TclTk >>> imosflm-aqua 1:1.0.4-3 Installs mosflm >>> GUI for use with aqua TclTk >>> i mosflm 7.0.6-2 X-ray data >>> processing, large display >>> >>> And below is the error. A workaround is removing mosflm, and using ipmosflm >>> from the ccp4 installation. >>> >>> Is any of this expected with these two packages under fink? >>> >>> Best, >>> Engin >>> >>> The package 'imosflm' will be installed. >>> Reading dependency for imosflm-1.0.4-3... >>> The following package will be installed or updated: >>> imosflm >>> Reading buildlock packages... >>> All buildlocks accounted for. >>> /sw/bin/dpkg-lockwait -i >>> /sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb >>> dpkg: considering removing mosflm in favour of imosflm ... >>> dpkg: no, cannot remove mosflm (--auto-deconfigure will help): >>> imosflm depends on mosflm (>= 7.0.6) >>> mosflm is to be removed. >>> dpkg: regarding .../imosflm_1.0.4-3_darwin-i386.deb containing imosflm: >>> imosflm conflicts with mosflm >>> mosflm (version 7.0.6-2) is installed. >>> /sw/bin/dpkg: error processing >>> /sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb >>> (--install): >>> conflicting packages - not installing imosflm >>> Errors were encountered while processing: >>> /sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb >>> ### execution of /sw/bin/dpkg-lockwait failed, exit code 1 >>> Failed: can't install package imosflm-1.0.4-3 >>> >>> -- >>> Engin Özkan >>> Post-doctoral Scholar >>> Laboratory of K. Christopher Garcia >>> Howard Hughes Medical Institute >>> Dept of Molecular and Cellular Physiology >>> 279 Campus Drive, Beckman Center B173 >>> Stanford School of Medicine >>> Stanford, CA 94305 >>> ph: (650)-498-7111 > > > -- > Engin Özkan > Post-doctoral Scholar > Laboratory of K. Christopher Garcia > Howard Hughes Medical Institute > Dept of Molecular and Cellular Physiology > 279 Campus Drive, Beckman Center B173 > Stanford School of Medicine > Stanford, CA 94305 > ph: (650)-498-7111 >
