Mike,

You could try rigid body refinement against the weak reflections to get the position of the molecules right and then normal restrained refinement against the strong reflections. I had a case like this some years ago and that helped...

  Esko

On 17.10.2010, at 6.48, Mike John wrote:



Hi all,
The data is 2.2A, p41212, unit cell has c axis twice longer than a or b. Data processed by HKL2000, the diffraction pattern shows Strong-weak-weak in C direction, indicating translational pseudo- symmetry. Xtriage analysis confirmed the pseudo-symmetry (large Patterson off- origin peak).
The model is 100% identical searching prob.
Phaser MR solved the structure easily with good Z-score and LLG(3 copies/a.u). The problem comes during the refinement: The R-free converged around 50% (R-factor 38%) and never go down even though I tried hard including, twin possibility.
Seeking help to lower the R-free. Thank you very much
Mike

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