Dear Kendall

2011/2/10 Kendall Nettles <[email protected]>:
> When I real space refine my ligand the hydrogens fly away. The ligand pdb 
> file and cif file were generated with progdr. I'm using Coot 0.6.2-pre-1.
>
> Kendall
>

This could be a problem with the naming conventions of pdb versions. I
don't remember which version Coot uses, but here is an old thread on
the subject http://www.mail-archive.com/[email protected]/msg00405.html

Best regards,
-- 
Folmer Fredslund

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