Hi all I'm trying to 'measure' the density in a region of my structure by integrating the electron density there (notwithstanding errors in F000). I understand that both overlapmap and phenix.real_space_correlation compute density surrounding individual atoms for their calculations. Is there any way to get that info out of either of them?
Are the per-residue "Fo" and "Fc" columns in the output of phenix.real_space_correlation actually what I am looking for? If so what are the units and how is F000 handled? Thanks a bunch to anyone who can clear this up. Matt
