Dear all,
how do you extract segments from a pdb file, so that from an input pdb
file you get output like this:
10-103, 120-174, 200-240
or, better yet:
A: 10-103, 120-174, 200-240
B: 10-104, 120-174, 199-241
if the N terminus is missing and there are two gaps in the structure.
I tend to open the pdb file with PyMOL and click on the ends, but a
script/command would be much quicker.
Thanks.
Andreas
--
Andreas Förster, Research Associate
Paul Freemont & Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London
http://www.msf.bio.ic.ac.uk
