Can you send the command script, and mapdump output for any input maps?
Also, if you are entering a PDB file, the cell, spacegroup, and an idea
of range of X, Y, and Z values?
On 09/06/2011 09:56 AM, Ingo P. Korndoerfer wrote:
hello,
it seems i am recently getting the above error quite a lot in mapmask. i
have searched for a solution, but only found the problem mentioned a
few times with no precise solution indicated.
would there be a way to find out HOW MUCH memory mapmask is hoping for ?
i do have 2 Gb of memory and 3 Gb of swap, and "limit" says
cputime unlimited
filesize unlimited
datasize unlimited
stacksize 8192 kbytes
coredumpsize 0 kbytes
memoryuse unlimited
vmemoryuse unlimited
descriptors 1024
memorylocked 64 kbytes
maxproc unlimited
mapmask itself dies in the middle of running and without error message
to its log file.
thanks
ingo
