On Mon, 2011-10-24 at 18:18 +0530, faisal tarique wrote:
> Hello everyone
> 
> 
> Is there any online server which could convert 3D structure of a
> protein into 2D image, the way program molscript does ?
> 
> 
> -- 
> Regards
> 
> Faisal
> School of Life Sciences
> JNU
> 
> 

One option is to directly access the PDB repository: the same images
that appear when you open a structure on the website.  The images are
in  

http://www.rcsb.org/pdb/images/<pdb-id>_asym_r_<resolution>.jpg

For example, if you want the image of the asymmetric unit of the 3LGH at
500x500 size, just do this (I assume *nix)

wget http://www.rcsb.org/pdb/images/3lgh_asym_r_500.jpg

You may also consider checking out alternatives here

http://molbiol-tools.ca/Protein_tertiary_structure.htm


Cheers,

Ed.




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