Dear Kavya
In principle you should be able to use newer version for old pdb file unless you have pdb v2 namings for DNA/RNA etc. New version of ccp4 has more dicitionary elements (10000 or so). Older version was compiled for 3000. That is the reason why old version does not work with new dictionary. regards Garib On 19 Mar 2012, at 10:10, Kavyashree M wrote: > Dear users, > > I was using Refmac 5.5.0102 (ccp4- 6.1.2) for refining the structures, I was > supposed to do one more round > of refinement with final model but unfortunately system crashed and i had to > install the new version of ccp4 > (6.2.0) which has refmac-5.6.0117. So my doubt here is - can I do the > refinement of the final model with this > version of refmac or do I need to complete with the older version itself? > > I however tried replacing the older version of refmac in place of new refmac. > But the job failed while running > (in the new interface) with an error message > " ERROR: number of monomers > 3000 /lib. limit/ > Change parameter MAXMLIST in "lib_com.fh" > > Do i need to use the old interface itself or can i use the new interface to > run old refmac binary? Kindly provide > some suggestion. > > Thanking you > With Regards > Kavya > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean. Garib N Murshudov Structural Studies Division MRC Laboratory of Molecular Biology Hills Road Cambridge CB2 0QH UK Email: ga...@mrc-lmb.cam.ac.uk Web http://www.mrc-lmb.cam.ac.uk
