Hi Careina
To my knowledge PISA by itself is not able to do interface prediction.
In any case there are a few methods available for protein-protein
interface prediction. See for example this nice compilation:
http://rosettadesigngroup.com/blog/58/10-protein-protein-interface-prediction-servers/
Hope it helps
Jose
On 08/08/2012 08:33 AM, Careina Edgooms wrote:
Dear ccp4ers
I just wonder whether anybody knows if the PISA software could be
used/modified to detect potential interfaces of interaction of
different proteins? This would be very useful as a tool to validate
protein-protein interactions detected by in vivo methods such as yeast
2 hybrid screens. If PISA is not quite there yet, does anyone know of
other software that could do a similar thing?
Best
Careina
