Hi Nate, The fasta licencing doesn't allow us to distribute it with the suite so it needs to be downloaded separately. For MrBUMP to find it you should have it somewhere in your system PATH. The easiest thing to do is to put the fasta3? .exe executable into your $CCP4/bin directory. However, to avoid having to do this every time you install a new version of CCP4 you should add the path to where you've installed the fasta executables to your system PATH environment variable. On windows this can be done by right mouse clicking on "My Computer", select "Properties" , select "Advanced" tab and then select "Environment Variables". Here you can edit the PATH variable and add the fasta bin directory location. In your case I guess that this will be "C:\CCP4\fasta\bin".
You'll need to restart your ccp4i for the new settings to take effect. If you need any more help with installation or running MrBUMP please let me know. Best wishes, Ronan From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of Nathan Pollock Sent: 16 August 2012 05:47 To: ccp4bb Subject: [ccp4bb] Mr. Bump and adding FASTA to CCP4 6.3 installation? Hello, Mr. Bump "requires Fasta to be installed". Could someone tell me what needs to be done to install Fasta so that it is seen and used by CCP4 6.3 programs? Installers for previous versions, 6.1 and 6.2, also installed Fasta, for 6.3 we are supposed to download and install manually. OK, I downloaded and unpacked into C:\CCP4\fasta\ - now what? The download site, http://fasta.bioch.virginia.edu/fasta_www2/fasta_down.shtml , says not a word about installation in Windows, nor it is mentioned in the Readme file. Thanks! - Nate -- Scanned by iCritical.
